Factsheet for TraesCS1A01G056500.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G057200.3	Wheat	cytosol	83.19	93.29
TraesCS1B01G073600.1	Wheat	cytosol	82.34	92.63
HORVU1Hr1G011370.2	Barley	cytosol	79.77	76.09
EES14834	Sorghum	cytosol	67.52	75.0
Zm00001d050166_P001	Maize	cytosol, extracellular	65.24	72.47
GSMUA_Achr4P20480_001	Banana	cytosol	58.97	65.92
Os08t0269800-01	Rice	cytosol	27.92	63.23
VIT_11s0037g00430.t01	Wine grape	cytosol	46.72	53.25
KRH72322	Soybean	cytosol	45.3	51.96
AT5G57900.1	Thale cress	cytosol	40.74	47.67
CDY51272	Canola	cytosol	40.17	47.0
Bra002686.1-P	Field mustard	cytosol	39.89	46.67
PGSC0003DMT400028954	Potato	cytosol	40.46	46.1
CDY57461	Canola	cytosol	39.32	46.0
Solyc07g005750.2.1	Tomato	cytosol	39.89	44.87
CDX68681	Canola	cytosol	33.9	40.89
CDY23249	Canola	cytosol	30.2	38.55
Bra010279.1-P	Field mustard	cytosol	32.76	38.21
AT4G30640.1	Thale cress	cytosol	32.19	37.54
CDY28199	Canola	cytosol	30.77	37.37
CDY55615	Canola	cytosol	25.64	37.19
CDY39233	Canola	cytosol	29.34	37.05
Bra024054.1-P	Field mustard	cytosol	29.34	37.05
Bra011207.1-P	Field mustard	cytosol	32.48	36.77
CDX72258	Canola	cytosol	29.34	36.65
CDY39226	Canola	cytosol	29.06	36.56
Bra024057.1-P	Field mustard	cytosol	29.06	36.56
CDX72257	Canola	cytosol	28.77	36.2
CDY39231	Canola	cytosol	22.22	36.11
Bra024055.1-P	Field mustard	cytosol	30.2	34.87
Bra038818.1-P	Field mustard	cytosol	15.95	34.36
CDX72259	Canola	cytosol	19.66	33.01
CDX68676	Canola	mitochondrion	11.68	30.37
CDY49309	Canola	cytosol	21.08	28.91
CDX68675	Canola	cytosol	12.82	26.79
Bra011205.1-P	Field mustard	cytosol	20.8	26.55
TraesCS6A01G316400.1	Wheat	cytosol	18.23	19.34
TraesCS3A01G490000.1	Wheat	cytosol, golgi, nucleus	18.23	19.05
CDY13002	Canola	nucleus	13.68	18.97
TraesCS2A01G316800.1	Wheat	nucleus	21.94	18.78
TraesCS7A01G178000.1	Wheat	cytosol	17.38	18.77

Protein Annotations

EnsemblPlants:TraesCS1A01G056500.2	EnsemblPlantsGene:TraesCS1A01G056500	Gene3D:1.20.1280.50	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:F-box-like_dom_sf	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt_Cys-con_subtyp	PANTHER:PTHR44078
SEG:seg	SMART:SM00367	SUPFAM:SSF52047	SUPFAM:SSF81383	MapMan:19.2.2.8.1.4.1	:

Description

No Description!

Coordinates

chr1A:-:36772401..36774284

Molecular Weight (calculated)

38816.6 Da

IEP (calculated)

6.855

GRAVY (calculated)

-0.100

Length

351 amino acids

Sequence
(BLAST)

001: MATGGEADEP AAPEGEGEGE RDWADLTPVC LAEAFSRLGP EDLWRGAMPC CRAWRAAARS RPALFAALDL EPAFEAVGAD AAEWWTPAFQ RRVDAMLRSA
101: ASLAAGELRV VRVRHCSGDA LASAAKRIPL WSEARLKIQT RLIPCGRMLR VTTLATWKGN YSPQLSILSI QSSPSVTDRS MLTVASCCPI LTELDISYCY
201: EVSYKSLEVI GQSCPNLVVL KRSIFNWLDS SEHVRTVPAE YLRACPQDGD REAIAISRSM PKLKQLVLKF AKLSGVGLNS IAEGCKELEV LDLFGCANLT
301: SRGIEQAAAN LKNLETLVKP NFYIPRSAFH MERYGHWQLY DERFQTNVFQ I

Best Arabidopsis Sequence Match ( AT4G30640.1 )
(BLAST)

001: MEVNGGEGKV EMGSGLYPDW SELTRECLLD IFSRLSQEQR WIGPMLVSKN WMNACYDPTL NTIFDLETRF LSFPESINWW TPEFEDKVDS FLRSVVDRSE
101: GGLTEIRIRH CTERSLSYAA ERCPNLEVLW IKNCPNVTDA SMEKIAMNCP NLRELDISYS YGITHESLIT LGRSCQNLKI LKRNLLPRLG PSLPTIVAPL
201: DYLATFPRYG NIEARIIGKY MTQLKHLEIR YSTLTARGLD SVCKGCSNLE YMDLRGCISL TRSDINTNTS GLKNLTEIIK PDFNPPIAVL RVPRPGNPRE
301: E

Arabidopsis Description

FBL19Putative F-box/LRR-repeat protein 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9M096]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.