Factsheet for Bra024057.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY39226	Canola	cytosol	99.64	99.64
CDX72257	Canola	cytosol	96.06	96.06
Bra024054.1-P	Field mustard	cytosol	61.29	61.51
Bra024055.1-P	Field mustard	cytosol	65.59	60.2
Bra038818.1-P	Field mustard	cytosol	29.75	50.92
Bra010279.1-P	Field mustard	cytosol	54.84	50.83
Bra011207.1-P	Field mustard	cytosol	54.84	49.35
Bra011205.1-P	Field mustard	cytosol	45.88	46.55
VIT_11s0037g00430.t01	Wine grape	cytosol	48.03	43.51
KRH72322	Soybean	cytosol	47.31	43.14
Bra002686.1-P	Field mustard	cytosol	45.88	42.67
PGSC0003DMT400028954	Potato	cytosol	42.29	38.31
Solyc07g005750.2.1	Tomato	cytosol	42.29	37.82
GSMUA_Achr4P20480_001	Banana	cytosol	40.86	36.31
Zm00001d050166_P001	Maize	cytosol, extracellular	40.86	36.08
EES14834	Sorghum	cytosol	37.99	33.54
TraesCS1D01G057200.3	Wheat	cytosol	36.56	32.59
TraesCS1B01G073600.1	Wheat	cytosol	35.84	32.05
Os08t0269800-01	Rice	cytosol	16.49	29.68
TraesCS1A01G056500.2	Wheat	cytosol	36.56	29.06
HORVU1Hr1G011370.2	Barley	cytosol	35.84	27.17
Bra038402.1-P	Field mustard	cytosol	20.79	18.3
Bra000662.1-P	Field mustard	cytosol	20.07	17.61

Protein Annotations

Gene3D:1.20.1280.50	MapMan:19.2.2.8.1.4.1	Gene3D:3.80.10.10	EnsemblPlantsGene:Bra024057	EnsemblPlants:Bra024057.1	EnsemblPlants:Bra024057.1-P
InterPro:F-box_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001810	InterPro:IPR032675
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt_Cys-con_subtyp	UniProt:M4E5K3	PFAM:PF12937	PANTHER:PTHR44078	PANTHER:PTHR44078:SF5
SMART:SM00367	SUPFAM:SSF52047	UniParc:UPI0002540E34	:	:	:

Description

AT4G30640 (E=1e-084) | F-box family protein (FBL19)

Coordinates

chrA03:+:27933437..27934346

Molecular Weight (calculated)

32075.7 Da

IEP (calculated)

7.997

GRAVY (calculated)

-0.315

Length

279 amino acids

Sequence
(BLAST)

001: MGSTLHPDWT ELIRECLIDI FSRLSTGKRW NGPMLVCKKW MNVCQDTSLN TVLDLESEFL TSTNTTYWWS PEFEEKVDTT IRSVVDQSQG ELRELRVRHC
101: TNQSLSYVAE RCPNLEVLWV KYSPKVTIES MKKIALNCPK LKELDISCSY EISCECMELV GTNCKNLQVL KRNLMQPSEV ARLRRYAYVK KQYLSVETLG
201: NVDAYTIGRH MHQLKHLELR NSTLTDKAFA HLCKRCSDLE YLDLVGSSYL TSVGVANGTS SLKNLKEIKK PDFAATVFY

Best Arabidopsis Sequence Match ( AT4G30640.1 )
(BLAST)

001: MEVNGGEGKV EMGSGLYPDW SELTRECLLD IFSRLSQEQR WIGPMLVSKN WMNACYDPTL NTIFDLETRF LSFPESINWW TPEFEDKVDS FLRSVVDRSE
101: GGLTEIRIRH CTERSLSYAA ERCPNLEVLW IKNCPNVTDA SMEKIAMNCP NLRELDISYS YGITHESLIT LGRSCQNLKI LKRNLLPRLG PSLPTIVAPL
201: DYLATFPRYG NIEARIIGKY MTQLKHLEIR YSTLTARGLD SVCKGCSNLE YMDLRGCISL TRSDINTNTS GLKNLTEIIK PDFNPPIAVL RVPRPGNPRE
301: E

Arabidopsis Description

FBL19Putative F-box/LRR-repeat protein 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9M096]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.