Factsheet for Bra011207.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY28199	Canola	cytosol	83.55	89.62
AT4G30640.1	Thale cress	cytosol	65.81	67.77
Bra010279.1-P	Field mustard	cytosol	64.84	66.78
Bra024054.1-P	Field mustard	cytosol	50.97	56.83
Bra024057.1-P	Field mustard	cytosol	49.35	54.84
Bra038818.1-P	Field mustard	cytosol	27.74	52.76
Bra024055.1-P	Field mustard	cytosol	50.0	50.99
VIT_11s0037g00430.t01	Wine grape	cytosol	49.03	49.35
Bra002686.1-P	Field mustard	cytosol	47.1	48.67
KRH72322	Soybean	cytosol	47.42	48.04
PGSC0003DMT400028954	Potato	cytosol	42.26	42.53
GSMUA_Achr4P20480_001	Banana	cytosol	41.61	41.08
Solyc07g005750.2.1	Tomato	cytosol	40.65	40.38
Bra011205.1-P	Field mustard	cytosol	34.84	39.27
Zm00001d050166_P001	Maize	cytosol, extracellular	38.39	37.66
TraesCS1D01G057200.3	Wheat	cytosol	37.42	37.06
EES14834	Sorghum	cytosol	37.74	37.03
TraesCS1B01G073600.1	Wheat	cytosol	37.1	36.86
Os08t0269800-01	Rice	cytosol	17.1	34.19
TraesCS1A01G056500.2	Wheat	cytosol	36.77	32.48
HORVU1Hr1G011370.2	Barley	cytosol	37.42	31.52
Bra038402.1-P	Field mustard	cytosol	21.61	21.14
Bra000662.1-P	Field mustard	cytosol	21.61	21.07

Protein Annotations

EnsemblPlants:Bra011207.1	EnsemblPlants:Bra011207.1-P	EnsemblPlantsGene:Bra011207	Gene3D:1.20.1280.50	Gene3D:3.80.10.10	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:F-box-like_dom_sf	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_Cys-con_subtyp	PANTHER:PTHR44078	PANTHER:PTHR44078:SF5	PFAM:PF13516	SMART:SM00367
SUPFAM:SSF52047	SUPFAM:SSF81383	UniParc:UPI0002546D91	UniProt:M4D403	MapMan:19.2.2.8.1.4.1	:

Description

AT4G30640 (E=1e-121) | F-box family protein (FBL19)

Coordinates

chrA01:-:3325569..3326779

Molecular Weight (calculated)

35576.1 Da

IEP (calculated)

6.097

GRAVY (calculated)

-0.093

Length

310 amino acids

Sequence
(BLAST)

001: MEVNHGGGMA LTLGPNWAEM TRECLLDIFS RLSQEERWMG PMLVCKTWMN TCHEPSLNTI FDLETRFQSF PESINWWIPE FEDKVDAFLR SVVDWSEGGL
101: TEIRVRHCTD RSLSYVAERC PKLEVLWINS CPHVTDASMA KIASNCPNLR ELDVSYSYCI SHEALSMLGR HCPNLEILKR NLFPRQGPNV SIIVAPVDYI
201: LAFPRYGNIE AQIIGRHMPR LKHLELQYCT LTVKGLTSVC KGCSDLEYLD LSGCISLTNS EITRCASSLK NLLEIKKPDF NRRLIFYSFQ IEENNGDAKL
301: YLFMVPFVLF

Best Arabidopsis Sequence Match ( AT4G30640.1 )
(BLAST)

001: MEVNGGEGKV EMGSGLYPDW SELTRECLLD IFSRLSQEQR WIGPMLVSKN WMNACYDPTL NTIFDLETRF LSFPESINWW TPEFEDKVDS FLRSVVDRSE
101: GGLTEIRIRH CTERSLSYAA ERCPNLEVLW IKNCPNVTDA SMEKIAMNCP NLRELDISYS YGITHESLIT LGRSCQNLKI LKRNLLPRLG PSLPTIVAPL
201: DYLATFPRYG NIEARIIGKY MTQLKHLEIR YSTLTARGLD SVCKGCSNLE YMDLRGCISL TRSDINTNTS GLKNLTEIIK PDFNPPIAVL RVPRPGNPRE
301: E

Arabidopsis Description

FBL19Putative F-box/LRR-repeat protein 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9M096]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.