Factsheet for Bra010279.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY23249	Canola	cytosol	90.37	98.91
CDY55615	Canola	cytosol	70.76	88.02
Bra011207.1-P	Field mustard	cytosol	66.78	64.84
Bra038818.1-P	Field mustard	cytosol	31.23	57.67
Bra024057.1-P	Field mustard	cytosol	50.83	54.84
Bra024054.1-P	Field mustard	cytosol	50.5	54.68
Bra024055.1-P	Field mustard	cytosol	51.49	50.99
VIT_11s0037g00430.t01	Wine grape	cytosol	51.83	50.65
Bra002686.1-P	Field mustard	cytosol	49.17	49.33
KRH72322	Soybean	cytosol	49.83	49.02
PGSC0003DMT400028954	Potato	cytosol	43.19	42.21
GSMUA_Achr4P20480_001	Banana	cytosol	43.19	41.4
Solyc07g005750.2.1	Tomato	cytosol	42.52	41.03
Bra011205.1-P	Field mustard	cytosol	37.21	40.73
Zm00001d050166_P001	Maize	cytosol, extracellular	41.2	39.24
EES14834	Sorghum	cytosol	40.53	38.61
TraesCS1B01G073600.1	Wheat	cytosol	38.54	37.18
TraesCS1D01G057200.3	Wheat	cytosol	38.54	37.06
TraesCS1A01G056500.2	Wheat	cytosol	38.21	32.76
HORVU1Hr1G011370.2	Barley	cytosol	39.2	32.07
Os08t0269800-01	Rice	cytosol	15.95	30.97
Bra000662.1-P	Field mustard	cytosol	20.93	19.81
Bra038402.1-P	Field mustard	cytosol	20.6	19.56

Protein Annotations

EnsemblPlants:Bra010279.1	EnsemblPlants:Bra010279.1-P	EnsemblPlantsGene:Bra010279	Gene3D:1.20.1280.50	Gene3D:3.80.10.10	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:F-box-like_dom_sf	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt_Cys-con_subtyp
PANTHER:PTHR44078	PANTHER:PTHR44078:SF5	SMART:SM00367	SUPFAM:SSF52047	SUPFAM:SSF81383	UniParc:UPI0002546F01
UniProt:M4D1D0	MapMan:19.2.2.8.1.4.1	:	:	:	:

Description

AT4G30640 (E=1e-130) | F-box family protein (FBL19)

Coordinates

chrA08:-:13602993..13604560

Molecular Weight (calculated)

34753.1 Da

IEP (calculated)

6.251

GRAVY (calculated)

-0.287

Length

301 amino acids

Sequence
(BLAST)

001: MEVNDEGEKL KMGSLLSPGW ADLTRECLID IFSRLTVDQR WIGPMLVCKT WMNVCHDPLF NTIFDLETRF QSFPESINWW NPEFEDKVDS FLRSVVDRSE
101: GGLTEIRVRH CTDRSLSYAA ERCPKLEVLW IKSCPNVTDA SMTKIASNCP NLKELDMSYS YGISHESLVM LGRNCNNLKI LKRNLYPRLD PNMPTIIAPL
201: DYLATYPKHA NVEAEVIGRH MPQLKQLEFR YTTLTAKGLA LVCEGCSDLE YMDLYGCISL RSEEITRWTS SLMSLREINK PNFMFPMAIL RMSRPDHPRY
301: G

Best Arabidopsis Sequence Match ( AT4G30640.1 )
(BLAST)

001: MEVNGGEGKV EMGSGLYPDW SELTRECLLD IFSRLSQEQR WIGPMLVSKN WMNACYDPTL NTIFDLETRF LSFPESINWW TPEFEDKVDS FLRSVVDRSE
101: GGLTEIRIRH CTERSLSYAA ERCPNLEVLW IKNCPNVTDA SMEKIAMNCP NLRELDISYS YGITHESLIT LGRSCQNLKI LKRNLLPRLG PSLPTIVAPL
201: DYLATFPRYG NIEARIIGKY MTQLKHLEIR YSTLTARGLD SVCKGCSNLE YMDLRGCISL TRSDINTNTS GLKNLTEIIK PDFNPPIAVL RVPRPGNPRE
301: E

Arabidopsis Description

FBL19Putative F-box/LRR-repeat protein 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9M096]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.