Factsheet for Bra024054.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY39233	Canola	cytosol	99.28	99.28
Bra024057.1-P	Field mustard	cytosol	61.51	61.29
Bra024055.1-P	Field mustard	cytosol	60.43	55.26
Bra038818.1-P	Field mustard	cytosol	31.3	53.37
Bra011207.1-P	Field mustard	cytosol	56.83	50.97
Bra010279.1-P	Field mustard	cytosol	54.68	50.5
Bra002686.1-P	Field mustard	cytosol	49.28	45.67
VIT_11s0037g00430.t01	Wine grape	cytosol	49.64	44.81
PGSC0003DMT400028954	Potato	cytosol	47.12	42.53
Solyc07g005750.2.1	Tomato	cytosol	47.48	42.31
KRH72322	Soybean	cytosol	46.4	42.16
Bra011205.1-P	Field mustard	cytosol	41.37	41.82
GSMUA_Achr4P20480_001	Banana	cytosol	42.45	37.58
EES14834	Sorghum	cytosol	38.85	34.18
Zm00001d050166_P001	Maize	cytosol, extracellular	38.85	34.18
TraesCS1B01G073600.1	Wheat	cytosol	37.77	33.65
TraesCS1D01G057200.3	Wheat	cytosol	37.77	33.55
Os08t0269800-01	Rice	cytosol	17.99	32.26
TraesCS1A01G056500.2	Wheat	cytosol	37.05	29.34
HORVU1Hr1G011370.2	Barley	cytosol	37.41	28.26
Bra038402.1-P	Field mustard	cytosol	24.1	21.14
Bra000662.1-P	Field mustard	cytosol	23.02	20.13

Protein Annotations

EnsemblPlants:Bra024054.1	EnsemblPlants:Bra024054.1-P	EnsemblPlantsGene:Bra024054	Gene3D:1.20.1280.50	Gene3D:3.80.10.10	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:F-box-like_dom_sf	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_Cys-con_subtyp	PANTHER:PTHR44078	PANTHER:PTHR44078:SF5	PFAM:PF13516	SMART:SM00367
SUPFAM:SSF52047	SUPFAM:SSF81383	UniParc:UPI0002540E37	UniProt:M4E5K0	MapMan:19.2.2.8.1.4.1	:

Description

AT4G30640 (E=1e-089) | F-box family protein (FBL19)

Coordinates

chrA03:+:27949711..27950761

Molecular Weight (calculated)

31583.3 Da

IEP (calculated)

5.184

GRAVY (calculated)

-0.080

Length

278 amino acids

Sequence
(BLAST)

001: MGWELGPDWT ELTQECLLDI FSRLSLEERW TGPMFVCKTW MNGCQDPSLN LVFDLETKFQ SLPGSLSCWW SPEFEDKIDS VLRSVVNRSE GGLKEVRIRH
101: CTDSSISYVA ERCPNLEVLS VKYCPKVTDD SMLKIALMCP NLKELDISFS YKISCVCVDM VGKNCKNIQT FKRNLMDPAE VMKSVPSNYM EDPSIFLIYG
201: NIDAYVIGKH MHQLKHLELR FSTLSDNGLA QLCEGCLNLE YLDLFGCSKL TNDGVTNSIS NLKHLKVIKI PSFPAFTI

Best Arabidopsis Sequence Match ( AT4G30640.1 )
(BLAST)

001: MEVNGGEGKV EMGSGLYPDW SELTRECLLD IFSRLSQEQR WIGPMLVSKN WMNACYDPTL NTIFDLETRF LSFPESINWW TPEFEDKVDS FLRSVVDRSE
101: GGLTEIRIRH CTERSLSYAA ERCPNLEVLW IKNCPNVTDA SMEKIAMNCP NLRELDISYS YGITHESLIT LGRSCQNLKI LKRNLLPRLG PSLPTIVAPL
201: DYLATFPRYG NIEARIIGKY MTQLKHLEIR YSTLTARGLD SVCKGCSNLE YMDLRGCISL TRSDINTNTS GLKNLTEIIK PDFNPPIAVL RVPRPGNPRE
301: E

Arabidopsis Description

FBL19Putative F-box/LRR-repeat protein 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9M096]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.