Factsheet for Bra024055.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY39231	Canola	cytosol	62.83	88.43
Bra024057.1-P	Field mustard	cytosol	60.2	65.59
Bra024054.1-P	Field mustard	cytosol	55.26	60.43
Bra038818.1-P	Field mustard	cytosol	29.28	54.6
Bra010279.1-P	Field mustard	cytosol	50.99	51.49
Bra011207.1-P	Field mustard	cytosol	50.99	50.0
Bra011205.1-P	Field mustard	cytosol	40.46	44.73
VIT_11s0037g00430.t01	Wine grape	cytosol	45.07	44.48
Bra002686.1-P	Field mustard	cytosol	43.09	43.67
KRH72322	Soybean	cytosol	42.11	41.83
PGSC0003DMT400028954	Potato	cytosol	40.46	39.94
Solyc07g005750.2.1	Tomato	cytosol	40.46	39.42
GSMUA_Achr4P20480_001	Banana	cytosol	39.47	38.22
Zm00001d050166_P001	Maize	cytosol, extracellular	37.5	36.08
EES14834	Sorghum	cytosol	36.18	34.81
TraesCS1B01G073600.1	Wheat	cytosol	35.2	34.29
TraesCS1D01G057200.3	Wheat	cytosol	35.2	34.19
Os08t0269800-01	Rice	cytosol	16.78	32.9
TraesCS1A01G056500.2	Wheat	cytosol	34.87	30.2
HORVU1Hr1G011370.2	Barley	cytosol	34.87	28.8
Bra000662.1-P	Field mustard	cytosol	20.72	19.81
Bra038402.1-P	Field mustard	cytosol	20.39	19.56

Protein Annotations

Gene3D:1.20.1280.50	MapMan:19.2.2.8.1.4.1	Gene3D:3.80.10.10	EnsemblPlantsGene:Bra024055	EnsemblPlants:Bra024055.1	EnsemblPlants:Bra024055.1-P
ncoils:Coil	InterPro:F-box-like_dom_sf	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001611
InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_Cys-con_subtyp	UniProt:M4E5K1	PFAM:PF13516
PANTHER:PTHR44078	PANTHER:PTHR44078:SF5	SMART:SM00367	SUPFAM:SSF52047	SUPFAM:SSF81383	UniParc:UPI0002540E36

Description

AT4G30640 (E=1e-087) | F-box family protein (FBL19)

Coordinates

chrA03:+:27945593..27946572

Molecular Weight (calculated)

34887.1 Da

IEP (calculated)

6.169

GRAVY (calculated)

-0.276

Length

304 amino acids

Sequence
(BLAST)

001: MGSRLRHDWS ELAPECLLDI FSRLSMGQRW NGPMLVCKTW MNLCQDPSFN TVLDLEAEFL SSPESFYWWS PEFEEKVDST IRSAVDQSQG SLTEIRVRHC
101: TDKSLSYVAE RCPNLEVLWV KYCPKVTDVS MRKIALNCPK LKELDVSCSF KICCACMKMV GTNCKNLQIL KRNSMQPSEV KRLRHCTYVQ YLSFEYHGDI
201: EADTIVRHMS QLKHLELRLF STLNDSAIVD LCEGCSNLEY LDLFGCGRLT SKGVTKATSK LKNLKVIKKP DFDVSGEALG MDVEIDLEWL KKLFEEYDGV
301: EHNG

Best Arabidopsis Sequence Match ( AT4G30640.1 )
(BLAST)

001: MEVNGGEGKV EMGSGLYPDW SELTRECLLD IFSRLSQEQR WIGPMLVSKN WMNACYDPTL NTIFDLETRF LSFPESINWW TPEFEDKVDS FLRSVVDRSE
101: GGLTEIRIRH CTERSLSYAA ERCPNLEVLW IKNCPNVTDA SMEKIAMNCP NLRELDISYS YGITHESLIT LGRSCQNLKI LKRNLLPRLG PSLPTIVAPL
201: DYLATFPRYG NIEARIIGKY MTQLKHLEIR YSTLTARGLD SVCKGCSNLE YMDLRGCISL TRSDINTNTS GLKNLTEIIK PDFNPPIAVL RVPRPGNPRE
301: E

Arabidopsis Description

FBL19Putative F-box/LRR-repeat protein 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9M096]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.