Factsheet for Bra011205.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX68675	Canola	cytosol	36.73	60.12
Bra038818.1-P	Field mustard	cytosol	29.09	49.08
Bra024057.1-P	Field mustard	cytosol	46.55	45.88
Bra024054.1-P	Field mustard	cytosol	41.82	41.37
Bra024055.1-P	Field mustard	cytosol	44.73	40.46
Bra010279.1-P	Field mustard	cytosol	40.73	37.21
Bra011207.1-P	Field mustard	cytosol	39.27	34.84
Bra002686.1-P	Field mustard	cytosol	35.27	32.33
Os08t0269800-01	Rice	cytosol	17.09	30.32
VIT_11s0037g00430.t01	Wine grape	cytosol	33.09	29.55
KRH72322	Soybean	cytosol	31.64	28.43
Solyc07g005750.2.1	Tomato	cytosol	30.91	27.24
PGSC0003DMT400028954	Potato	cytosol	29.82	26.62
GSMUA_Achr4P20480_001	Banana	cytosol	28.73	25.16
Zm00001d050166_P001	Maize	cytosol, extracellular	28.0	24.37
TraesCS1D01G057200.3	Wheat	cytosol	27.27	23.96
TraesCS1B01G073600.1	Wheat	cytosol	26.18	23.08
EES14834	Sorghum	cytosol	25.82	22.47
TraesCS1A01G056500.2	Wheat	cytosol	26.55	20.8
HORVU1Hr1G011370.2	Barley	cytosol	27.27	20.38
Bra038402.1-P	Field mustard	cytosol	17.82	15.46
Bra000662.1-P	Field mustard	cytosol	17.45	15.09
CDX68676	Canola	mitochondrion	6.91	14.07

Protein Annotations

EnsemblPlants:Bra011205.1	EnsemblPlants:Bra011205.1-P	EnsemblPlantsGene:Bra011205	Gene3D:1.20.1280.50	Gene3D:3.80.10.10	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	InterPro:IPR001810	InterPro:IPR032675
InterPro:LRR_dom_sf	PANTHER:PTHR44078	PANTHER:PTHR44078:SF5	PFAM:PF12937	SUPFAM:SSF52047	SUPFAM:SSF81383
UniParc:UPI0002546D93	UniProt:M4D401	MapMan:19.2.2.8.1.4.1	:	:	:

Description

AT4G30640 (E=8e-054) | F-box family protein (FBL19)

Coordinates

chrA01:-:3336025..3338434

Molecular Weight (calculated)

31348.3 Da

IEP (calculated)

4.705

GRAVY (calculated)

-0.331

Length

275 amino acids

Sequence
(BLAST)

001: MGSRVLPDWT ELTPECLLDI FSRLSIGQLW NGPMLVCKTW TKLCHDPSLN ITLDLEAEFL SSEDSNHWWS PEFEEKVDST IRSVVDRSKG GLKEIRVRHC
101: TDQSLSYVAE RCPNLEVLGV TYSPKITVES MRKIASNCTK LIELDISCSY EISGYCIELV DQMGSRVHPD WTELPPECLL GIFSRLSMGQ RRNGQMLVCK
201: TWKNLCQDPS LNTILDLKAE FLSSADSIYW WSPESEEKVN STIRSVVDQS EGGLKEIRVR HCTDQSLFFD NRPDG

Best Arabidopsis Sequence Match ( AT4G30640.1 )
(BLAST)

001: MEVNGGEGKV EMGSGLYPDW SELTRECLLD IFSRLSQEQR WIGPMLVSKN WMNACYDPTL NTIFDLETRF LSFPESINWW TPEFEDKVDS FLRSVVDRSE
101: GGLTEIRIRH CTERSLSYAA ERCPNLEVLW IKNCPNVTDA SMEKIAMNCP NLRELDISYS YGITHESLIT LGRSCQNLKI LKRNLLPRLG PSLPTIVAPL
201: DYLATFPRYG NIEARIIGKY MTQLKHLEIR YSTLTARGLD SVCKGCSNLE YMDLRGCISL TRSDINTNTS GLKNLTEIIK PDFNPPIAVL RVPRPGNPRE
301: E

Arabidopsis Description

FBL19Putative F-box/LRR-repeat protein 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9M096]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.