Factsheet for Bra038818.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY49309	Canola	cytosol	95.09	60.55
Bra024054.1-P	Field mustard	cytosol	53.37	31.3
Bra010279.1-P	Field mustard	cytosol	57.67	31.23
Os08t0269800-01	Rice	cytosol	28.83	30.32
Bra024057.1-P	Field mustard	cytosol	50.92	29.75
Bra024055.1-P	Field mustard	cytosol	54.6	29.28
Bra011205.1-P	Field mustard	cytosol	49.08	29.09
Bra011207.1-P	Field mustard	cytosol	52.76	27.74
KRH72322	Soybean	cytosol	48.47	25.82
Bra002686.1-P	Field mustard	cytosol	47.24	25.67
VIT_11s0037g00430.t01	Wine grape	cytosol	46.63	24.68
Solyc07g005750.2.1	Tomato	cytosol	44.79	23.4
PGSC0003DMT400028954	Potato	cytosol	44.17	23.38
GSMUA_Achr4P20480_001	Banana	cytosol	38.65	20.06
Zm00001d050166_P001	Maize	cytosol, extracellular	36.2	18.67
EES14834	Sorghum	cytosol	34.97	18.04
TraesCS1B01G073600.1	Wheat	cytosol	34.36	17.95
TraesCS1D01G057200.3	Wheat	cytosol	33.74	17.57
HORVU1Hr1G011370.2	Barley	cytosol	36.81	16.3
TraesCS1A01G056500.2	Wheat	cytosol	34.36	15.95
Bra038402.1-P	Field mustard	cytosol	21.47	11.04
Bra000662.1-P	Field mustard	cytosol	21.47	11.01

Protein Annotations

EnsemblPlants:Bra038818.1	EnsemblPlants:Bra038818.1-P	EnsemblPlantsGene:Bra038818	Gene3D:1.20.1280.50	Gene3D:3.80.10.10	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:F-box-like_dom_sf	InterPro:IPR032675	InterPro:LRR_dom_sf	PANTHER:PTHR44078
PANTHER:PTHR44078:SF5	SUPFAM:SSF52047	SUPFAM:SSF81383	UniParc:UPI00025410F9	UniProt:M4FCJ9	MapMan:19.2.2.8.1.4.1

Description

AT4G30640 (E=4e-051) | F-box family protein (FBL19)

Coordinates

chrA07:-:1302289..1303346

Molecular Weight (calculated)

18684.3 Da

IEP (calculated)

4.746

GRAVY (calculated)

-0.327

Length

163 amino acids

Sequence
(BLAST)

001: MMNEAKIRMN DNNEGNKEAI GSGLLRDWSE LNKECLIDIV SRLSMEERWR GPMLVCKPWM YACDDPSLNS VFDLDTWFEG SRISNLWFSY EFEQKVDSFL
101: RCVVDRSQGG LKEIRVRHCS DQSLLYAAER CPSLEVLCLK SCLSVTDASI SKIATSCPNL ERP

Best Arabidopsis Sequence Match ( AT4G30640.1 )
(BLAST)

001: MEVNGGEGKV EMGSGLYPDW SELTRECLLD IFSRLSQEQR WIGPMLVSKN WMNACYDPTL NTIFDLETRF LSFPESINWW TPEFEDKVDS FLRSVVDRSE
101: GGLTEIRIRH CTERSLSYAA ERCPNLEVLW IKNCPNVTDA SMEKIAMNCP NLRELDISYS YGITHESLIT LGRSCQNLKI LKRNLLPRLG PSLPTIVAPL
201: DYLATFPRYG NIEARIIGKY MTQLKHLEIR YSTLTARGLD SVCKGCSNLE YMDLRGCISL TRSDINTNTS GLKNLTEIIK PDFNPPIAVL RVPRPGNPRE
301: E

Arabidopsis Description

FBL19Putative F-box/LRR-repeat protein 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9M096]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.