CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra038818.1-P	Field mustard	cytosol	60.55	95.09
CDY39231	Canola	cytosol	37.89	44.91
CDX68675	Canola	cytosol	27.73	42.26
CDY55615	Canola	cytosol	37.89	40.08
CDY23249	Canola	cytosol	41.41	38.55
CDY13002	Canola	nucleus	35.16	35.57
CDY39233	Canola	cytosol	38.28	35.25
CDY39226	Canola	cytosol	37.89	34.77
CDX68681	Canola	cytosol	39.45	34.71
CDX72258	Canola	cytosol	37.89	34.52
CDX72257	Canola	cytosol	36.72	33.69
Os08t0269800-01	Rice	cytosol	19.92	32.9
CDY28199	Canola	cytosol	36.72	32.53
KRH72322	Soybean	cytosol	38.67	32.35
VIT_11s0037g00430.t01	Wine grape	cytosol	36.72	30.52
CDY51272	Canola	cytosol	35.55	30.33
CDY57461	Canola	cytosol	35.16	30.0
PGSC0003DMT400028954	Potato	cytosol	35.94	29.87
Solyc07g005750.2.1	Tomato	cytosol	36.33	29.81
CDX72259	Canola	cytosol	21.88	26.79
Zm00001d050166_P001	Maize	cytosol, extracellular	30.86	25.0
GSMUA_Achr4P20480_001	Banana	cytosol	30.47	24.84
EES14834	Sorghum	cytosol	29.69	24.05
TraesCS1B01G073600.1	Wheat	cytosol	28.91	23.72
TraesCS1D01G057200.3	Wheat	cytosol	28.52	23.32
HORVU1Hr1G011370.2	Barley	cytosol	30.47	21.2
TraesCS1A01G056500.2	Wheat	cytosol	28.91	21.08
CDY39232	Canola	cytosol	1.95	20.83
CDY05035	Canola	cytosol	19.92	16.04
CDX90703	Canola	cytosol	19.92	16.04
CDY51578	Canola	cytosol	16.8	14.93
CDX75124	Canola	cytosol	16.02	14.39
CDX68676	Canola	mitochondrion	6.64	12.59

Protein Annotations

EnsemblPlants:CDY49309	EnsemblPlantsGene:GSBRNA2T00092734001	Gene3D:1.20.1280.50	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:F-box-like_dom_sf	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt_Cys-con_subtyp	PANTHER:PTHR44001
PANTHER:PTHR44001:SF2	ProteinID:CDY49309	ProteinID:CDY49309.1	SMART:SM00367	SUPFAM:SSF52047	SUPFAM:SSF81383
UniParc:UPI0004EE2031	UniProt:A0A078IIV0	MapMan:19.2.2.8.1.4.1	:	:	:

Description

BnaA07g01580DBnaA07g01580D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IIV0]

Coordinates

chrLK032824:-:56121..57469

Molecular Weight (calculated)

29202.1 Da

IEP (calculated)

5.838

GRAVY (calculated)

-0.289

Length

256 amino acids

Sequence
(BLAST)

001: MMNEAKIRMN DDNEGNKEAI GSGLLRDWSE LNKECLIDIV SRLSMEERWR GPMLVCKPWM YACDDPSLNS VFDLDTWFEG SRISNLWFSY EFEQKVDSFL
101: RCVVDRSQGR LKEIRVRHCS DQSLLYAAER CPSLEVLCLK SCLSVTDASI SKIAASCPNL NVLWIQSCLN VTDASMAKIA SSCPKLRELD ISHSIEISQK
201: ALKMIERSCE NVKIIVEPPS NVKLSRDEAS KFGLSVRSIT RRELLEHIRN INTNDN

Best Arabidopsis Sequence Match ( AT4G30640.1 )
(BLAST)

001: MEVNGGEGKV EMGSGLYPDW SELTRECLLD IFSRLSQEQR WIGPMLVSKN WMNACYDPTL NTIFDLETRF LSFPESINWW TPEFEDKVDS FLRSVVDRSE
101: GGLTEIRIRH CTERSLSYAA ERCPNLEVLW IKNCPNVTDA SMEKIAMNCP NLRELDISYS YGITHESLIT LGRSCQNLKI LKRNLLPRLG PSLPTIVAPL
201: DYLATFPRYG NIEARIIGKY MTQLKHLEIR YSTLTARGLD SVCKGCSNLE YMDLRGCISL TRSDINTNTS GLKNLTEIIK PDFNPPIAVL RVPRPGNPRE
301: E

Arabidopsis Description

FBL19Putative F-box/LRR-repeat protein 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9M096]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.