Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400017590 | Potato | cytosol | 41.67 | 3.21 |
| Solyc01g088240.2.1 | Tomato | cytosol | 37.5 | 2.93 |
| CDY57461 | Canola | cytosol | 33.33 | 2.67 |
| CDY51272 | Canola | cytosol | 33.33 | 2.67 |
| CDX90703 | Canola | cytosol | 33.33 | 2.52 |
| CDY05035 | Canola | cytosol | 33.33 | 2.52 |
| CDY39231 | Canola | cytosol | 20.83 | 2.31 |
| CDX68676 | Canola | mitochondrion | 12.5 | 2.22 |
| CDY39233 | Canola | cytosol | 25.0 | 2.16 |
| CDX72258 | Canola | cytosol | 25.0 | 2.14 |
| CDY49309 | Canola | cytosol | 20.83 | 1.95 |
| CDY39226 | Canola | cytosol | 20.83 | 1.79 |
| CDX72257 | Canola | cytosol | 20.83 | 1.79 |
| CDX68675 | Canola | cytosol | 12.5 | 1.79 |
| VIT_07s0031g03110.t01 | Wine grape | cytosol | 20.83 | 1.77 |
| CDY28199 | Canola | cytosol | 20.83 | 1.73 |
| CDX68681 | Canola | cytosol | 20.83 | 1.72 |
| CDY55615 | Canola | cytosol | 16.67 | 1.65 |
| CDY23249 | Canola | cytosol | 16.67 | 1.45 |
| CDX72259 | Canola | cytosol | 12.5 | 1.44 |
| CDX75124 | Canola | cytosol | 16.67 | 1.4 |
| CDY51578 | Canola | cytosol | 16.67 | 1.39 |
| Os04t0448700-00 | Rice | mitochondrion | 20.83 | 1.21 |
| KXG26411 | Sorghum | mitochondrion | 20.83 | 1.2 |
| CDY13002 | Canola | nucleus | 12.5 | 1.19 |
| TraesCS2A01G316800.1 | Wheat | nucleus | 16.67 | 0.98 |
| TraesCS2B01G334900.1 | Wheat | cytosol, nucleus, plastid | 16.67 | 0.97 |
| TraesCS2D01G314700.1 | Wheat | cytosol, nucleus, plastid | 16.67 | 0.97 |
Protein Annotations
| EnsemblPlants:CDY39232 | EnsemblPlantsGene:GSBRNA2T00067452001 | ProteinID:CDY39232 | ProteinID:CDY39232.1 | UniParc:UPI0004EDEB52 | UniProt:A0A078HMY2 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaA03g50440DBnaA03g50440D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HMY2]
Coordinates
chrLK032443:+:258985..259059
Molecular Weight (calculated)
2909.4 Da
IEP (calculated)
3.879
GRAVY (calculated)
-0.688
Length
24 amino acids
Sequence
(BLAST)
(BLAST)
1: MDVEIDLEWL KKLFEEYDGV EHNG
001: MDSYWRLKNL VNDLPVSTSL SRQGSIYSWT VDQFQTSLGL DCGSMNMDEL VKHISSAEET QEGSQRQGST TLPPTLSKQN VGEVWKSITE EKHTNNNGGV
101: TNITHLQGQQ TLGEITLEEF FIRAGARGGN TNGGSIHDSS SSISGNPHTS LGVQIQPKAM VSDFMNNMVP RSHDSYLHQN VNGSMSTYQP QQSIMSMPNG
201: YSYGKQIRFS NGSLGSGNQS LQDTKRSLVP SVATIPSEAI TCSPVTPFPT LNGKQKINGE SSLLSPSPYI SNGSTSTRGG KINSEITAEK QFVDKKLRRK
301: IKNRESAARS RARKQAQTME VEVELENLKK DYEELLKQHV ELRKRQMEPG MISLHERPER KLRRTKSDIK
101: TNITHLQGQQ TLGEITLEEF FIRAGARGGN TNGGSIHDSS SSISGNPHTS LGVQIQPKAM VSDFMNNMVP RSHDSYLHQN VNGSMSTYQP QQSIMSMPNG
201: YSYGKQIRFS NGSLGSGNQS LQDTKRSLVP SVATIPSEAI TCSPVTPFPT LNGKQKINGE SSLLSPSPYI SNGSTSTRGG KINSEITAEK QFVDKKLRRK
301: IKNRESAARS RARKQAQTME VEVELENLKK DYEELLKQHV ELRKRQMEPG MISLHERPER KLRRTKSDIK
Arabidopsis Description
BZIP15ABSCISIC ACID-INSENSITIVE 5-like protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FMM7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.