Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400017590 | Potato | cytosol | 49.65 | 44.87 |
| Solyc01g088240.2.1 | Tomato | cytosol | 48.23 | 44.3 |
| VIT_18s0001g06220.t01 | Wine grape | cytosol | 33.69 | 32.53 |
| TraesCS2B01G334900.1 | Wheat | cytosol, nucleus, plastid | 45.04 | 30.75 |
| TraesCS2A01G316800.1 | Wheat | nucleus | 44.33 | 30.49 |
| Os04t0448700-00 | Rice | mitochondrion | 43.97 | 30.02 |
| TraesCS2D01G314700.1 | Wheat | cytosol, nucleus, plastid | 43.97 | 29.95 |
| VIT_00s0391g00040.t01 | Wine grape | cytosol | 33.33 | 29.65 |
| KXG26411 | Sorghum | mitochondrion | 42.55 | 28.85 |
| VIT_11s0037g00430.t01 | Wine grape | cytosol | 24.47 | 22.4 |
| CDY39232 | Canola | cytosol | 1.77 | 20.83 |
Protein Annotations
| Gene3D:1.20.1280.50 | EntrezGene:104879953 | MapMan:19.2.2.8.1.4.6 | Gene3D:3.80.10.10 | ProteinID:CBI21656 | ProteinID:CBI21656.3 |
| UniProt:D7SWK7 | InterPro:F-box-like_dom_sf | EMBL:FN595233 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR032675 | InterPro:LRR_dom_sf | PANTHER:PTHR44841 | PANTHER:PTHR44841:SF1 | SUPFAM:SSF52047 | SUPFAM:SSF81383 |
| UniParc:UPI00015C9E72 | ArrayExpress:VIT_07s0031g03110 | EnsemblPlantsGene:VIT_07s0031g03110 | EnsemblPlants:VIT_07s0031g03110.t01 | RefSeq:XP_010653020.1 | SEG:seg |
Description
No Description!
Coordinates
chr7:-:19902054..19905869
Molecular Weight (calculated)
31806.4 Da
IEP (calculated)
5.785
GRAVY (calculated)
-0.174
Length
282 amino acids
Sequence
(BLAST)
(BLAST)
001: MANFGGRKNG IVSRAMWEGL NPEILALILV RIPVEELLQT IPLVCKSWWS AVAGPYCWSN IDVEDWCRRW SRFDRVDSLV RKLVRRSRGM CRRLSAYRLG
101: DPGFAFAANW VRCLKVLQIP MSEVSDKMVE KHAVATLTVL DISYCLRITS KGLEAVGKSC KFLIQLKRNM PPLELEETEK RAKKMDDGEA MAIANTMPGL
201: NRLELAYGRF GDHGLNAILT NCKALTHLDI EGCLYVELNG DLEQRCGQLM DFKPPWTDDD HFLAVAAAAD DDTEDFSSSE SE
101: DPGFAFAANW VRCLKVLQIP MSEVSDKMVE KHAVATLTVL DISYCLRITS KGLEAVGKSC KFLIQLKRNM PPLELEETEK RAKKMDDGEA MAIANTMPGL
201: NRLELAYGRF GDHGLNAILT NCKALTHLDI EGCLYVELNG DLEQRCGQLM DFKPPWTDDD HFLAVAAAAD DDTEDFSSSE SE
001: MEEDCEFRHW DELIPDALGL IFSHLPLQEV LTVVPRVCKA WNRAVTGPYC WQEIDIELWS NRFHQSDHLD RMLEMLIPRS AGSLRKLSVT GLRNDSIFSF
101: IAQHAGSLKT LKVPRSGLTN SGVVNVAEKL SSLTFLDLSY CCKIGPEAIQ AIGKHCKSLR EFCRNMHPLD VASVVSHDDE AYAIANTMPK LKRLEIAYHR
201: VSTEGVLKIL SCCVFLEFLE LRGCWDVQLD NKFFKEKFPD MKVLGPRVIG FYDMINDWED CCSDYFSDGS DYLAWEFFED GVMGEFYEDE FEHGWDDNFY
301: AENAVLDMEP HIWPPSP
101: IAQHAGSLKT LKVPRSGLTN SGVVNVAEKL SSLTFLDLSY CCKIGPEAIQ AIGKHCKSLR EFCRNMHPLD VASVVSHDDE AYAIANTMPK LKRLEIAYHR
201: VSTEGVLKIL SCCVFLEFLE LRGCWDVQLD NKFFKEKFPD MKVLGPRVIG FYDMINDWED CCSDYFSDGS DYLAWEFFED GVMGEFYEDE FEHGWDDNFY
301: AENAVLDMEP HIWPPSP
Arabidopsis Description
FBW2FBW2 [Source:UniProtKB/TrEMBL;Acc:A0A178UUC5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.