Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G334900.1 | Wheat | cytosol, nucleus, plastid | 92.03 | 92.25 |
| TraesCS2A01G316800.1 | Wheat | nucleus | 89.13 | 90.0 |
| Os04t0448700-00 | Rice | mitochondrion | 57.73 | 57.87 |
| KXG26411 | Sorghum | mitochondrion | 55.8 | 55.53 |
| VIT_07s0031g03110.t01 | Wine grape | cytosol | 29.95 | 43.97 |
| Solyc01g088240.2.1 | Tomato | cytosol | 26.57 | 35.83 |
| PGSC0003DMT400017590 | Potato | cytosol | 25.85 | 34.29 |
| TraesCS1D01G057200.3 | Wheat | cytosol | 19.81 | 26.2 |
| TraesCS7D01G179800.1 | Wheat | cytosol | 17.87 | 22.91 |
| TraesCS6D01G296000.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion | 19.32 | 20.46 |
| CDY39232 | Canola | cytosol | 0.97 | 16.67 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G314700.1 | EnsemblPlantsGene:TraesCS2D01G314700 | Gene3D:3.80.10.10 | InterPro:IPR032675 | InterPro:LRR_dom_sf | PANTHER:PTHR44841 |
| PANTHER:PTHR44841:SF1 | SEG:seg | SUPFAM:SSF52047 | MapMan:19.2.2.8.1.4.6 | : | : |
Description
No Description!
Coordinates
chr2D:-:404125141..404127491
Molecular Weight (calculated)
44925.1 Da
IEP (calculated)
4.801
GRAVY (calculated)
-0.424
Length
414 amino acids
Sequence
(BLAST)
(BLAST)
001: MKRRNPPSGA GLPAGEGSGW EAKWERPNGR WRGRQPAPVV KWSHAEAMKK KPKVGGGAAL VGDGGGWRME TEAEMVGLDG RSCGGRGFFG TSWAEAAEKS
101: ADAATGGGEN EWRLPETEKA NPCEAVEGGG GGDARGDEVK EELYDWRWTE AVSPEIMALI LRGRFAADEI ARGPSAVCRA WREAAASPDM WGDVDIEAWC
201: RRIKCRVRAD AAVRRLVARS QGTIRRLSAY RVGDAALAYA AASGKLLNVL LIPMSEISDQ AVEKYVKCFT ALRVLDISYC VKVTSRGMEA IGRQCKSLAQ
301: LKRNMPPPQP PLGNNAAPTV VEDEALAVAN TMPMLTQLEL AYGLFSDIGL DAILNQCPLL RTLDILGSLN VRLDGDIEDR CCALESFREP WEPEYHEYSS
401: SGGDGDYDDT ESDD
101: ADAATGGGEN EWRLPETEKA NPCEAVEGGG GGDARGDEVK EELYDWRWTE AVSPEIMALI LRGRFAADEI ARGPSAVCRA WREAAASPDM WGDVDIEAWC
201: RRIKCRVRAD AAVRRLVARS QGTIRRLSAY RVGDAALAYA AASGKLLNVL LIPMSEISDQ AVEKYVKCFT ALRVLDISYC VKVTSRGMEA IGRQCKSLAQ
301: LKRNMPPPQP PLGNNAAPTV VEDEALAVAN TMPMLTQLEL AYGLFSDIGL DAILNQCPLL RTLDILGSLN VRLDGDIEDR CCALESFREP WEPEYHEYSS
401: SGGDGDYDDT ESDD
001: MEEDCEFRHW DELIPDALGL IFSHLPLQEV LTVVPRVCKA WNRAVTGPYC WQEIDIELWS NRFHQSDHLD RMLEMLIPRS AGSLRKLSVT GLRNDSIFSF
101: IAQHAGSLKT LKVPRSGLTN SGVVNVAEKL SSLTFLDLSY CCKIGPEAIQ AIGKHCKSLR EFCRNMHPLD VASVVSHDDE AYAIANTMPK LKRLEIAYHR
201: VSTEGVLKIL SCCVFLEFLE LRGCWDVQLD NKFFKEKFPD MKVLGPRVIG FYDMINDWED CCSDYFSDGS DYLAWEFFED GVMGEFYEDE FEHGWDDNFY
301: AENAVLDMEP HIWPPSP
101: IAQHAGSLKT LKVPRSGLTN SGVVNVAEKL SSLTFLDLSY CCKIGPEAIQ AIGKHCKSLR EFCRNMHPLD VASVVSHDDE AYAIANTMPK LKRLEIAYHR
201: VSTEGVLKIL SCCVFLEFLE LRGCWDVQLD NKFFKEKFPD MKVLGPRVIG FYDMINDWED CCSDYFSDGS DYLAWEFFED GVMGEFYEDE FEHGWDDNFY
301: AENAVLDMEP HIWPPSP
Arabidopsis Description
FBW2FBW2 [Source:UniProtKB/TrEMBL;Acc:A0A178UUC5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.