Factsheet for VIT_00s0391g00040.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400041822	Potato	cytosol	70.35	69.47
Solyc11g009050.1.1	Tomato	cytosol	70.35	67.58
PGSC0003DMT400043293	Potato	cytosol	41.96	62.74
GSMUA_Achr6P30460_001	Banana	cytosol	60.88	59.75
VIT_18s0001g06220.t01	Wine grape	cytosol	54.57	59.25
GSMUA_Achr9P14880_001	Banana	cytosol	59.62	58.88
GSMUA_Achr3P06570_001	Banana	cytosol	58.36	57.63
GSMUA_AchrUn_...	Banana	cytosol	58.04	57.32
TraesCS7D01G179800.1	Wheat	cytosol	54.26	53.25
TraesCS7B01G083700.1	Wheat	cytosol	54.26	53.25
TraesCS7A01G178000.1	Wheat	cytosol	54.26	52.92
Os06t0219700-01	Rice	cytosol	52.37	52.37
Os02t0757700-01	Rice	cytosol	52.68	51.54
Zm00001d052200_P001	Maize	cytosol	54.26	51.34
Zm00001d018111_P002	Maize	cytosol	54.89	49.86
TraesCS6B01G347000.1	Wheat	cytosol	51.42	49.85
TraesCS6A01G316400.1	Wheat	cytosol	50.79	48.64
HORVU7Hr1G036660.5	Barley	cytosol	50.16	47.89
EES07216	Sorghum	cytosol, golgi, mitochondrion, plastid	54.57	47.4
TraesCS3B01G550600.1	Wheat	cytosol	47.0	47.15
TraesCS3A01G490000.1	Wheat	cytosol, golgi, nucleus	48.27	45.54
HORVU6Hr1G077730.1	Barley	mitochondrion	33.44	41.73
TraesCS6D01G296000.1	Wheat	endoplasmic reticulum, golgi, mitochondrion	50.79	41.18
HORVU6Hr1G077670.2	Barley	cytosol, mitochondrion	46.37	40.83
HORVU3Hr1G108730.1	Barley	cytosol, golgi, mitochondrion	49.21	40.21
HORVU7Hr1G122060.1	Barley	cytosol	21.77	38.55
HORVU7Hr1G121910.1	Barley	cytosol	10.09	36.36
VIT_07s0031g03110.t01	Wine grape	cytosol	29.65	33.33
HORVU7Hr1G122300.1	Barley	mitochondrion	8.2	26.26
VIT_11s0037g00430.t01	Wine grape	cytosol	23.03	23.7

Protein Annotations

Gene3D:1.20.1280.50	EntrezGene:100250103	wikigene:100250103	MapMan:19.2.2.8.1.4.6	Gene3D:3.80.10.10	ProteinID:CBI29445
ProteinID:CBI29445.3	UniProt:D7TG22	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	EMBL:FN595782	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR001810	InterPro:IPR032675	EntrezGene:LOC100250103	wikigene:LOC100250103
InterPro:LRR_dom_sf	PFAM:PF00646	PANTHER:PTHR44841	PANTHER:PTHR44841:SF2	SUPFAM:SSF52047	SUPFAM:SSF81383
TIGR:TC54534	UniParc:UPI00015CE653	ArrayExpress:VIT_00s0391g00040	EnsemblPlantsGene:VIT_00s0391g00040	EnsemblPlants:VIT_00s0391g00040.t01	unigene:Vvi.3417
RefSeq:XP_002269291	RefSeq:XP_002269291.1	RefSeq:XP_003635300	RefSeq:XP_003635300.1	RefSeq:XP_010646936.1	RefSeq:XP_010646937.1
RefSeq:XP_010646938.1	RefSeq:XP_010646939.1	RefSeq:XP_010646940.1	:	:	:

Description

No Description!

Coordinates

chrUn:+:27152779..27155413

Molecular Weight (calculated)

35896.0 Da

IEP (calculated)

4.333

GRAVY (calculated)

-0.101

Length

317 amino acids

Sequence
(BLAST)

001: MEEGCEFRSW DELIPDALGL IFSNLSLQEI LTVIPRVCKS WRKTVMGPYC WQEIDIVEWS QRSSPENLDR MLEMLMTRSA GSHRKLCVSG LPTDASFSFV
101: ADHAKSLQTL RLPRSEISDP IVEEVAWKLS TITFLDVSYC RKMGAPALEA IGKHCKFLTG LRRIMHPLEI IDKLTQDDEA LAIAATMPKL KHLEIAYLLV
201: STEPVLKILA SCCELELLDV RGCWNVKLDE KLIKKFSGLK VVGPLVIDCY EGNGWDDCSA YSGSSGYLAW DFVAGEMDYY DDELYAAWED ESMDDLELRF
301: YDGFDADNAG FDWPQSP

Best Arabidopsis Sequence Match ( AT4G08980.3 )
(BLAST)

001: MEEDCEFRHW DELIPDALGL IFSHLPLQEV LTVVPRVCKA WNRAVTGPYC WQEIDIELWS NRFHQSDHLD RMLEMLIPRS AGSLRKLSVT GLRNDSIFSF
101: IAQHAGSLKT LKVPRSGLTN SGVVNVAEKL SSLTFLDLSY CCKIGPEAIQ AIGKHCKSLR EFCRNMHPLD VASVVSHDDE AYAIANTMPK LKRLEIAYHR
201: VSTEGVLKIL SCCVFLEFLE LRGCWDVQLD NKFFKEKFPD MKVLGPRVIG FYDMINDWED CCSDYFSDGS DYLAWEFFED GVMGEFYEDE FEHGWDDNFY
301: AENAVLDMEP HIWPPSP

Arabidopsis Description

FBW2FBW2 [Source:UniProtKB/TrEMBL;Acc:A0A178UUC5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.