Factsheet for GSMUA_AchrUn_randomP17500_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P30460_001	Banana	cytosol	86.6	86.07
GSMUA_Achr3P06570_001	Banana	cytosol	77.57	77.57
GSMUA_Achr9P14880_001	Banana	cytosol	75.39	75.39
Os02t0757700-01	Rice	cytosol	63.86	63.27
Os06t0219700-01	Rice	cytosol	61.68	62.46
Zm00001d052200_P001	Maize	cytosol	62.93	60.3
TraesCS7B01G083700.1	Wheat	cytosol	59.81	59.44
TraesCS7D01G179800.1	Wheat	cytosol	59.19	58.82
TraesCS7A01G178000.1	Wheat	cytosol	59.5	58.77
VIT_00s0391g00040.t01	Wine grape	cytosol	57.32	58.04
TraesCS6B01G347000.1	Wheat	cytosol	58.88	57.8
EES07216	Sorghum	cytosol, golgi, mitochondrion, plastid	64.8	56.99
TraesCS6A01G316400.1	Wheat	cytosol	56.7	54.98
VIT_18s0001g06220.t01	Wine grape	cytosol	49.84	54.79
TraesCS3B01G550600.1	Wheat	cytosol	53.27	54.11
Zm00001d018111_P002	Maize	cytosol	57.94	53.3
KRH53038	Soybean	cytosol	53.27	53.27
KRH62319	Soybean	cytosol	53.27	53.27
TraesCS3A01G490000.1	Wheat	cytosol, golgi, nucleus	55.45	52.98
PGSC0003DMT400041822	Potato	cytosol	52.96	52.96
HORVU7Hr1G036660.5	Barley	cytosol	54.52	52.71
Solyc11g009050.1.1	Tomato	cytosol	52.96	51.52
CDX90703	Canola	cytosol	50.47	50.94
AT4G08980.2	Thale cress	cytosol	50.16	50.79
Bra000662.1-P	Field mustard	cytosol	50.16	50.63
CDY05035	Canola	cytosol	50.16	50.63
HORVU6Hr1G077730.1	Barley	mitochondrion	39.88	50.39
Bra038402.1-P	Field mustard	cytosol	49.53	50.16
CDY51578	Canola	cytosol	43.93	48.96
CDX75124	Canola	cytosol	42.99	48.42
TraesCS6D01G296000.1	Wheat	endoplasmic reticulum, golgi, mitochondrion	58.57	48.08
HORVU6Hr1G077670.2	Barley	cytosol, mitochondrion	52.96	47.22
PGSC0003DMT400043293	Potato	cytosol	31.15	47.17
HORVU3Hr1G108730.1	Barley	cytosol, golgi, mitochondrion	56.39	46.65
HORVU7Hr1G122060.1	Barley	cytosol	23.05	41.34
HORVU7Hr1G121910.1	Barley	cytosol	10.59	38.64
HORVU7Hr1G122300.1	Barley	mitochondrion	9.97	32.32
GSMUA_Achr4P20480_001	Banana	cytosol	21.81	22.29

Protein Annotations

EnsemblPlants:GSMUA_AchrUn_randomP17500_001	EnsemblPlants:GSMUA_AchrUn_randomT17500_001	EnsemblPlantsGene:GSMUA_AchrUn_randomG17500_001	Gene3D:1.20.1280.50	Gene3D:3.80.10.10	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:F-box_dom	InterPro:IPR001810	InterPro:IPR032675	InterPro:LRR_dom_sf
PANTHER:PTHR44841	PANTHER:PTHR44841:SF2	PFAM:PF12937	SEG:seg	SUPFAM:SSF52047	UniParc:UPI00029688F6
UniProt:M0UA09	MapMan:19.2.2.8.1.4.6	:	:	:	:

Description

F-box protein FBW2 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG17500_001]

Coordinates

chrchrUn_random:-:83021421..83023536

Molecular Weight (calculated)

36783.7 Da

IEP (calculated)

4.515

GRAVY (calculated)

-0.188

Length

321 amino acids

Sequence
(BLAST)

001: MAEGSEVRAW EELIPDALSL IFRNLSLQDI LTVIPRVCKS WERVVSGPYC WQEIDIEEWS LRCKPEHLDQ MLHMLIARSC GSFRRLSVSG LHTESMFSFI
101: ADHAGSLRRL ELPRSEISDS IAEVIAPRLS NITFLDISYC RKIGARAIEA FGKHCRSLIV LRRRMHPLEV TNKVCQDEEA YAIAVSMPRL RHLELAYLLL
201: TTRAVLDILS SCKDLEYLDL RGCWDVKLDQ KYLKERHSGL KVLGPDIIDC YEQSCWDGCS DYSDSSVYTW DFMEDGEDVY EGLSDDDSIW EDDQGLEGFE
301: VRFYGGGFSD AVTVFDWPPS P

Best Arabidopsis Sequence Match ( AT4G08980.3 )
(BLAST)

001: MEEDCEFRHW DELIPDALGL IFSHLPLQEV LTVVPRVCKA WNRAVTGPYC WQEIDIELWS NRFHQSDHLD RMLEMLIPRS AGSLRKLSVT GLRNDSIFSF
101: IAQHAGSLKT LKVPRSGLTN SGVVNVAEKL SSLTFLDLSY CCKIGPEAIQ AIGKHCKSLR EFCRNMHPLD VASVVSHDDE AYAIANTMPK LKRLEIAYHR
201: VSTEGVLKIL SCCVFLEFLE LRGCWDVQLD NKFFKEKFPD MKVLGPRVIG FYDMINDWED CCSDYFSDGS DYLAWEFFED GVMGEFYEDE FEHGWDDNFY
301: AENAVLDMEP HIWPPSP

Arabidopsis Description

FBW2FBW2 [Source:UniProtKB/TrEMBL;Acc:A0A178UUC5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.