Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra038402.1-P | Field mustard | cytosol | 91.48 | 91.48 |
| CDY51578 | Canola | cytosol | 82.97 | 91.32 |
| CDY05035 | Canola | cytosol | 91.48 | 91.19 |
| CDX90703 | Canola | cytosol | 90.54 | 90.25 |
| Bra000662.1-P | Field mustard | cytosol | 90.22 | 89.94 |
| CDX75124 | Canola | cytosol | 80.76 | 89.82 |
| KRH62319 | Soybean | cytosol | 59.31 | 58.57 |
| KRH53038 | Soybean | cytosol | 58.99 | 58.26 |
| VIT_18s0001g06220.t01 | Wine grape | cytosol | 50.16 | 54.45 |
| GSMUA_Achr6P30460_001 | Banana | cytosol | 53.0 | 52.01 |
| GSMUA_Achr3P06570_001 | Banana | cytosol | 51.73 | 51.09 |
| GSMUA_Achr9P14880_001 | Banana | cytosol | 51.42 | 50.78 |
| GSMUA_AchrUn_... | Banana | cytosol | 50.79 | 50.16 |
| TraesCS7B01G083700.1 | Wheat | cytosol | 49.21 | 48.3 |
| TraesCS7D01G179800.1 | Wheat | cytosol | 49.21 | 48.3 |
| TraesCS7A01G178000.1 | Wheat | cytosol | 49.21 | 48.0 |
| Os06t0219700-01 | Rice | cytosol | 47.63 | 47.63 |
| Os02t0757700-01 | Rice | cytosol | 47.95 | 46.91 |
| Zm00001d052200_P001 | Maize | cytosol | 49.53 | 46.87 |
| TraesCS6B01G347000.1 | Wheat | cytosol | 47.32 | 45.87 |
| TraesCS6A01G316400.1 | Wheat | cytosol | 47.63 | 45.62 |
| TraesCS3B01G550600.1 | Wheat | cytosol | 44.48 | 44.62 |
| HORVU7Hr1G036660.5 | Barley | cytosol | 46.69 | 44.58 |
| Zm00001d018111_P002 | Maize | cytosol | 48.27 | 43.84 |
| EES07216 | Sorghum | cytosol, golgi, mitochondrion, plastid | 50.47 | 43.84 |
| TraesCS3A01G490000.1 | Wheat | cytosol, golgi, nucleus | 45.43 | 42.86 |
| HORVU6Hr1G077730.1 | Barley | mitochondrion | 30.91 | 38.58 |
| TraesCS6D01G296000.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion | 47.32 | 38.36 |
| HORVU6Hr1G077670.2 | Barley | cytosol, mitochondrion | 43.22 | 38.06 |
| HORVU3Hr1G108730.1 | Barley | cytosol, golgi, mitochondrion | 43.53 | 35.57 |
| HORVU7Hr1G122060.1 | Barley | cytosol | 18.93 | 33.52 |
| HORVU7Hr1G122300.1 | Barley | mitochondrion | 8.83 | 28.28 |
| AT5G57900.1 | Thale cress | cytosol | 24.29 | 25.67 |
| HORVU7Hr1G121910.1 | Barley | cytosol | 6.94 | 25.0 |
| AT4G30640.1 | Thale cress | cytosol | 19.87 | 20.93 |
Protein Annotations
| Gene3D:1.20.1280.50 | MapMan:19.2.2.8.1.4.6 | Gene3D:3.80.10.10 | EntrezGene:826476 | UniProt:A0A178UUC5 | ProteinID:AAD17367.1 |
| ProteinID:AEE82703.1 | ProteinID:AEE82704.1 | ProteinID:AEE82705.1 | ProteinID:AEE82706.1 | ProteinID:AEE82707.1 | EMBL:AK317222 |
| ArrayExpress:AT4G08980 | EnsemblPlantsGene:AT4G08980 | RefSeq:AT4G08980 | TAIR:AT4G08980 | RefSeq:AT4G08980-TAIR-G | EnsemblPlants:AT4G08980.2 |
| TAIR:AT4G08980.2 | EMBL:AY084585 | EMBL:BT002431 | EMBL:BT008715 | ProteinID:CAB78022.1 | InterPro:F-box_dom |
| Symbol:FBW2 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006464 | GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009056 | GO:GO:0009719 | GO:GO:0009737 | GO:GO:0009987 | GO:GO:0010608 | GO:GO:0010629 |
| GO:GO:0016567 | GO:GO:0019538 | InterPro:IPR001611 | InterPro:IPR001810 | InterPro:IPR032675 | InterPro:LRR_dom_sf |
| InterPro:Leu-rich_rpt | RefSeq:NP_001078359.1 | RefSeq:NP_001154215.1 | RefSeq:NP_567343.1 | RefSeq:NP_849346.1 | RefSeq:NP_974523.1 |
| ProteinID:OAO97213.1 | PFAM:PF12937 | PFAM:PF13516 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR44841 | PANTHER:PTHR44841:SF2 | UniProt:Q9ZPE4 |
| SUPFAM:SSF52047 | UniParc:UPI000005EB96 | : | : | : | : |
Description
FBW2FBW2 [Source:UniProtKB/TrEMBL;Acc:A0A178UUC5]
Coordinates
chr4:+:5758020..5760569
Molecular Weight (calculated)
36484.5 Da
IEP (calculated)
4.619
GRAVY (calculated)
-0.181
Length
317 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEDCEFRHW DELIPDALGL IFSHLPLQEV LTVVPRVCKA WNRAVTGPYC WQEIDIELWS NRFHQSDHLD RMLEMLIPRS AGSLRKLSVT GLRNDSIFSF
101: IAQHAGSLKT LKVPRSGLTN SGVVNVAEKL SSLTFLDLSY CCKIGPEAIQ AIGKHCKSLR EFCRNMHPLD VASVVSHDDE AYAIANTMPK LKRLEIAYHR
201: VSTEGVLKIL SCCVFLEFLE LRGCWDVQLD NKFFKEKFPD MKVLGPRVIG FYDMINDWED CCSDYFSDGS DYLAWEFFED GVMGEFYEDE FEHGWDDNFY
301: AENAVLDMEP HIWPPSP
101: IAQHAGSLKT LKVPRSGLTN SGVVNVAEKL SSLTFLDLSY CCKIGPEAIQ AIGKHCKSLR EFCRNMHPLD VASVVSHDDE AYAIANTMPK LKRLEIAYHR
201: VSTEGVLKIL SCCVFLEFLE LRGCWDVQLD NKFFKEKFPD MKVLGPRVIG FYDMINDWED CCSDYFSDGS DYLAWEFFED GVMGEFYEDE FEHGWDDNFY
301: AENAVLDMEP HIWPPSP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.