Factsheet for HORVU6Hr1G077670.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
TargetP:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G347000.1	Wheat	cytosol	80.56	88.69
HORVU6Hr1G077730.1	Barley	mitochondrion	57.78	81.89
TraesCS6A01G316400.1	Wheat	cytosol	74.17	80.66
TraesCS6D01G296000.1	Wheat	endoplasmic reticulum, golgi, mitochondrion	80.28	73.91
Os02t0757700-01	Rice	cytosol	64.17	71.3
Zm00001d052200_P001	Maize	cytosol	65.28	70.15
Zm00001d018111_P002	Maize	cytosol	63.33	65.33
EES07216	Sorghum	cytosol, golgi, mitochondrion, plastid	65.28	64.38
GSMUA_Achr6P30460_001	Banana	cytosol	48.61	54.18
HORVU7Hr1G036660.5	Barley	cytosol	49.44	53.61
GSMUA_Achr3P06570_001	Banana	cytosol	47.78	53.58
GSMUA_Achr9P14880_001	Banana	cytosol	47.22	52.96
GSMUA_AchrUn_...	Banana	cytosol	47.22	52.96
VIT_00s0391g00040.t01	Wine grape	cytosol	40.83	46.37
PGSC0003DMT400041822	Potato	cytosol	40.0	44.86
HORVU3Hr1G108730.1	Barley	cytosol, golgi, mitochondrion	48.33	44.85
VIT_18s0001g06220.t01	Wine grape	cytosol	35.83	44.18
Solyc11g009050.1.1	Tomato	cytosol	40.28	43.94
AT4G08980.2	Thale cress	cytosol	38.06	43.22
Bra038402.1-P	Field mustard	cytosol	37.78	42.9
Bra000662.1-P	Field mustard	cytosol	37.78	42.77
CDY05035	Canola	cytosol	37.78	42.77
CDX90703	Canola	cytosol	37.78	42.77
KRH62319	Soybean	cytosol	37.22	41.74
KRH53038	Soybean	cytosol	36.94	41.43
CDX75124	Canola	cytosol	32.22	40.7
CDY51578	Canola	cytosol	32.5	40.62
PGSC0003DMT400043293	Potato	cytosol	23.89	40.57
HORVU7Hr1G122060.1	Barley	cytosol	17.78	35.75
HORVU7Hr1G121910.1	Barley	cytosol	7.22	29.55
HORVU7Hr1G122300.1	Barley	mitochondrion	7.5	27.27
HORVU1Hr1G011370.2	Barley	cytosol	15.28	14.95

Protein Annotations

EnsemblPlants:HORVU6Hr1G077670.2	EnsemblPlantsGene:HORVU6Hr1G077670	Gene3D:3.80.10.10	InterPro:IPR032675	InterPro:LRR_dom_sf	PANTHER:PTHR44841
PANTHER:PTHR44841:SF2	SEG:seg	SUPFAM:SSF52047	UniParc:UPI000B46C90D	UniProt:A0A287UTB1	MapMan:19.2.2.8.1.4.6

Description

No Description!

Coordinates

chrchr6H:-:531857838..531859586

Molecular Weight (calculated)

37645.3 Da

IEP (calculated)

4.603

GRAVY (calculated)

-0.226

Length

360 amino acids

Sequence
(BLAST)

001: AHRVARLLCS GEAAAALSRS PDDPRAVSDP KGRRGAMVES EYRCXXXXXX XXXXXXFRNL PLQEVLTVVP RVCKSWGRVV AGPYCWQEID IEEWSQQRQS
101: RPDQLVRMVE LLVRRSSGAC RRISVSGLPC HPLFSFIGDH ARALRTLEIP RSDISDAVVE AVAPGLPNLT FLDVSSCTKX XXXXXXXFGS HCRSLAALRR
201: VMHPIDVAGR NACGQHDEAR AIARTMPGLR HLEVGYMLVT TEAILEVLSR CRGLEFVDLR GCWAVDEALL RERHPGLSVL GPAVDDCFEN SYWEECSDDD
301: DDDVYSWELM DDDEYYAVVG SDDDEAVWAD GPGLVENLEV RFYGGGFSES XAGFDWPASP

Best Arabidopsis Sequence Match ( AT4G08980.1 )
(BLAST)

001: MEEDCEFRHW DELIPDALGL IFSHLPLQEV LTVVPRVCKA WNRAVTGPYC WQEIDIELWS NRFHQSDHLD RMLEMLIPRS AGSLRKLSVT GLRNDSIFSF
101: IAQHAGSLKT LKVPRSGLTN SGVVNVAEKL SSLTFLDLSY CCKIGPEAIQ AIGKHCKSLR EFCRNMHPLD VASVVSHDDE AYAIANTMPK LKRLEIAYHR
201: VSTEGVLKIL SCCVFLEFLE LRGCWDVQLD NKFFKEKFPD MKVLGPRVIG FYDMINDWED CCSDYFSDGS DYLAWEFFED GVMGEFYEDE FEHGWDDNFY
301: AENAVLDMEP HIWPPSP

Arabidopsis Description

FBW2FBW2 [Source:UniProtKB/TrEMBL;Acc:A0A178UUC5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.