Factsheet for HORVU3Hr1G108730.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi, cytosol

Predictor Summary:

mitochondrion 2
cytosol 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, mitochondrion
Any Predictor:	cytosol, golgi, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
TargetP:	mitochondrion
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G550600.1	Wheat	cytosol	61.86	75.95
TraesCS3A01G490000.1	Wheat	cytosol, golgi, nucleus	65.21	75.3
Os06t0219700-01	Rice	cytosol	54.9	67.19
GSMUA_Achr6P30460_001	Banana	cytosol	49.48	59.44
HORVU7Hr1G036660.5	Barley	cytosol	50.77	59.34
GSMUA_Achr3P06570_001	Banana	cytosol	47.68	57.63
GSMUA_Achr9P14880_001	Banana	cytosol	47.16	57.01
GSMUA_AchrUn_...	Banana	cytosol	46.65	56.39
HORVU6Hr1G077730.1	Barley	mitochondrion	33.25	50.79
HORVU7Hr1G122060.1	Barley	cytosol	22.94	49.72
VIT_00s0391g00040.t01	Wine grape	cytosol	40.21	49.21
HORVU6Hr1G077670.2	Barley	cytosol, mitochondrion	44.85	48.33
VIT_18s0001g06220.t01	Wine grape	cytosol	36.34	48.29
PGSC0003DMT400041822	Potato	cytosol	38.66	46.73
Solyc11g009050.1.1	Tomato	cytosol	38.66	45.45
KRH62319	Soybean	cytosol	36.86	44.55
KRH53038	Soybean	cytosol	36.6	44.24
AT4G08980.2	Thale cress	cytosol	35.57	43.53
PGSC0003DMT400043293	Potato	cytosol	23.71	43.4
HORVU7Hr1G121910.1	Barley	cytosol	9.79	43.18
Bra038402.1-P	Field mustard	cytosol	34.79	42.59
CDY05035	Canola	cytosol	34.79	42.45
CDX90703	Canola	cytosol	34.79	42.45
Bra000662.1-P	Field mustard	cytosol	34.79	42.45
CDX75124	Canola	cytosol	30.93	42.11
CDY51578	Canola	cytosol	31.19	42.01
HORVU7Hr1G122300.1	Barley	mitochondrion	8.76	34.34
HORVU1Hr1G011370.2	Barley	cytosol	17.01	17.93

Protein Annotations

EnsemblPlants:HORVU3Hr1G108730.1	EnsemblPlantsGene:HORVU3Hr1G108730	Gene3D:1.20.1280.50	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:F-box-like_dom_sf	InterPro:IPR032675	InterPro:LRR_dom_sf	PANTHER:PTHR44841	PANTHER:PTHR44841:SF3
SEG:seg	SUPFAM:SSF52047	SUPFAM:SSF81383	UniParc:UPI000B46A6B1	UniProt:A0A287MMF3	MapMan:19.2.2.8.1.4.6

Description

No Description!

Coordinates

chrchr3H:+:676162232..676168032

Molecular Weight (calculated)

44367.8 Da

IEP (calculated)

5.430

GRAVY (calculated)

-0.297

Length

388 amino acids

Sequence
(BLAST)

001: GKARASNKRR KTPDYTRLYL SPHRTPLAVS LLLLLTPSLP QIHHHHRFSS SATWWAYNLH RRTWKDRSGM EECSKNIYWE DLQRDALGII FCKLSLQEIL
101: RVVPGVCKPW SEVVSGSYCW QDIDIQEWSQ QSTPDQIISM VHMLLARSAG SCRRLSVSRL PNDSLFAFIA DHAKSLETLE IPRSEISDSI VEDVAQRLSK
201: VTFLDVSGCT KIGARALEAF GKNSKCLVRL RRVMHPMDLV GKVCHNDEAH AIACNMPKLC NLEMGYMLIT TKAVFEIASK CHDLKLLDLR CCWDVDDNLL
301: REKFAGLKIL CPRVDDCYEN NFWEECSDDS YDDSIYSWEQ FMDDDYFAMG GDGEAIWEDD HTLEGQEVIF YGGVFGEGFA GFDWPDSP

Best Arabidopsis Sequence Match ( AT4G08980.3 )
(BLAST)

001: MEEDCEFRHW DELIPDALGL IFSHLPLQEV LTVVPRVCKA WNRAVTGPYC WQEIDIELWS NRFHQSDHLD RMLEMLIPRS AGSLRKLSVT GLRNDSIFSF
101: IAQHAGSLKT LKVPRSGLTN SGVVNVAEKL SSLTFLDLSY CCKIGPEAIQ AIGKHCKSLR EFCRNMHPLD VASVVSHDDE AYAIANTMPK LKRLEIAYHR
201: VSTEGVLKIL SCCVFLEFLE LRGCWDVQLD NKFFKEKFPD MKVLGPRVIG FYDMINDWED CCSDYFSDGS DYLAWEFFED GVMGEFYEDE FEHGWDDNFY
301: AENAVLDMEP HIWPPSP

Arabidopsis Description

FBW2FBW2 [Source:UniProtKB/TrEMBL;Acc:A0A178UUC5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.