Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os02t0757700-01 | Rice | cytosol | 78.23 | 76.54 |
| TraesCS7B01G083700.1 | Wheat | cytosol | 77.92 | 76.47 |
| TraesCS7D01G179800.1 | Wheat | cytosol | 77.6 | 76.16 |
| TraesCS7A01G178000.1 | Wheat | cytosol | 77.29 | 75.38 |
| TraesCS3B01G550600.1 | Wheat | cytosol | 67.51 | 67.72 |
| HORVU7Hr1G036660.5 | Barley | cytosol | 68.77 | 65.66 |
| TraesCS3A01G490000.1 | Wheat | cytosol, golgi, nucleus | 68.77 | 64.88 |
| GSMUA_Achr3P06570_001 | Banana | cytosol | 62.78 | 61.99 |
| GSMUA_Achr6P30460_001 | Banana | cytosol | 63.09 | 61.92 |
| GSMUA_AchrUn_... | Banana | cytosol | 62.46 | 61.68 |
| GSMUA_Achr9P14880_001 | Banana | cytosol | 62.15 | 61.37 |
| HORVU3Hr1G108730.1 | Barley | cytosol, golgi, mitochondrion | 67.19 | 54.9 |
| VIT_00s0391g00040.t01 | Wine grape | cytosol | 52.37 | 52.37 |
| PGSC0003DMT400041822 | Potato | cytosol | 52.05 | 51.4 |
| VIT_18s0001g06220.t01 | Wine grape | cytosol | 46.06 | 50.0 |
| Solyc11g009050.1.1 | Tomato | cytosol | 51.73 | 49.7 |
| HORVU7Hr1G122060.1 | Barley | cytosol | 27.44 | 48.6 |
| KRH62319 | Soybean | cytosol | 48.9 | 48.29 |
| KRH53038 | Soybean | cytosol | 48.58 | 47.98 |
| AT4G08980.2 | Thale cress | cytosol | 47.63 | 47.63 |
| Bra000662.1-P | Field mustard | cytosol | 47.63 | 47.48 |
| CDY05035 | Canola | cytosol | 47.32 | 47.17 |
| CDX90703 | Canola | cytosol | 47.32 | 47.17 |
| Bra038402.1-P | Field mustard | cytosol | 46.69 | 46.69 |
| PGSC0003DMT400043293 | Potato | cytosol | 30.6 | 45.75 |
| CDY51578 | Canola | cytosol | 41.32 | 45.49 |
| CDX75124 | Canola | cytosol | 40.69 | 45.26 |
| HORVU7Hr1G121910.1 | Barley | cytosol | 11.36 | 40.91 |
| HORVU7Hr1G122300.1 | Barley | mitochondrion | 12.62 | 40.4 |
| Os08t0269800-01 | Rice | cytosol | 10.09 | 20.65 |
| Os04t0448700-00 | Rice | mitochondrion | 26.18 | 20.1 |
Protein Annotations
| EMBL:AK070008 | EnsemblPlants:Os06t0219700-01 | EnsemblPlantsGene:Os06g0219700 | EntrezGene:4340510 | Gene3D:1.20.1280.50 | Gene3D:3.80.10.10 |
| InterPro:IPR032675 | InterPro:LRR_dom_sf | PANTHER:PTHR44841 | PANTHER:PTHR44841:SF3 | ProteinID:BAD37239.1 | ProteinID:BAF19078.1 |
| ProteinID:BAS96818.1 | ProteinID:EAZ36295.1 | RefSeq:XP_015641083.1 | SUPFAM:SSF52047 | UniParc:UPI00004261FE | UniProt:Q67X80 |
| MapMan:19.2.2.8.1.4.6 | : | : | : | : | : |
Description
F-box protein 304Similar to TA2 protein (Fragment). (Os06t0219700-01)
Coordinates
chr6:-:6160836..6163651
Molecular Weight (calculated)
35602.2 Da
IEP (calculated)
4.703
GRAVY (calculated)
-0.297
Length
317 amino acids
Sequence
(BLAST)
(BLAST)
001: MGECSEHRCW DELLPDALGL IFRKLSLKDV LTVVPRVCKS WGRVVAGPYC WQEIDIQEWS QQQSKPDQLK RMVRMLVARS GGSFHRISVS GLPGDPLFTF
101: IGDHARSLKT MELPRSDISD SLVENVAPRL SNVTFLDISS CTKIGARALE AFGKHCKSLI GLRRVMHPTD VVGRASQHDE ARAIACNMPK LRHLEIGYML
201: IATKAVVEIA SQCHDLKFLD LRGCWNVDDK LLQESYPGLK VVGPYVDDCY ENSFWEECSD DSDDSIYWEL MDDDYYAAGS DDEGIWDDGQ GLEGLEVRFY
301: GGGFSESHAG FDWPPSP
101: IGDHARSLKT MELPRSDISD SLVENVAPRL SNVTFLDISS CTKIGARALE AFGKHCKSLI GLRRVMHPTD VVGRASQHDE ARAIACNMPK LRHLEIGYML
201: IATKAVVEIA SQCHDLKFLD LRGCWNVDDK LLQESYPGLK VVGPYVDDCY ENSFWEECSD DSDDSIYWEL MDDDYYAAGS DDEGIWDDGQ GLEGLEVRFY
301: GGGFSESHAG FDWPPSP
001: MEEDCEFRHW DELIPDALGL IFSHLPLQEV LTVVPRVCKA WNRAVTGPYC WQEIDIELWS NRFHQSDHLD RMLEMLIPRS AGSLRKLSVT GLRNDSIFSF
101: IAQHAGSLKT LKVPRSGLTN SGVVNVAEKL SSLTFLDLSY CCKIGPEAIQ AIGKHCKSLR EFCRNMHPLD VASVVSHDDE AYAIANTMPK LKRLEIAYHR
201: VSTEGVLKIL SCCVFLEFLE LRGCWDVQLD NKFFKEKFPD MKVLGPRVIG FYDMINDWED CCSDYFSDGS DYLAWEFFED GVMGEFYEDE FEHGWDDNFY
301: AENAVLDMEP HIWPPSP
101: IAQHAGSLKT LKVPRSGLTN SGVVNVAEKL SSLTFLDLSY CCKIGPEAIQ AIGKHCKSLR EFCRNMHPLD VASVVSHDDE AYAIANTMPK LKRLEIAYHR
201: VSTEGVLKIL SCCVFLEFLE LRGCWDVQLD NKFFKEKFPD MKVLGPRVIG FYDMINDWED CCSDYFSDGS DYLAWEFFED GVMGEFYEDE FEHGWDDNFY
301: AENAVLDMEP HIWPPSP
Arabidopsis Description
FBW2FBW2 [Source:UniProtKB/TrEMBL;Acc:A0A178UUC5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.