Factsheet for HORVU7Hr1G122060.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid, secretory
MultiLoc:	cytosol
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G121910.1	Barley	cytosol	48.6	98.86
HORVU7Hr1G122300.1	Barley	mitochondrion	25.7	46.46
HORVU6Hr1G077730.1	Barley	mitochondrion	39.66	27.95
HORVU7Hr1G036660.5	Barley	cytosol	51.4	27.71
TraesCS3A01G490000.1	Wheat	cytosol, golgi, nucleus	51.96	27.68
Os06t0219700-01	Rice	cytosol	48.6	27.44
TraesCS3B01G550600.1	Wheat	cytosol	48.04	27.22
VIT_18s0001g06220.t01	Wine grape	cytosol	43.02	26.37
PGSC0003DMT400043293	Potato	cytosol	29.05	24.53
GSMUA_Achr6P30460_001	Banana	cytosol	43.58	24.15
GSMUA_Achr9P14880_001	Banana	cytosol	43.02	23.99
GSMUA_Achr3P06570_001	Banana	cytosol	41.9	23.36
GSMUA_AchrUn_...	Banana	cytosol	41.34	23.05
HORVU3Hr1G108730.1	Barley	cytosol, golgi, mitochondrion	49.72	22.94
KRH53038	Soybean	cytosol	39.11	21.81
KRH62319	Soybean	cytosol	39.11	21.81
VIT_00s0391g00040.t01	Wine grape	cytosol	38.55	21.77
CDY51578	Canola	cytosol	34.64	21.53
CDX75124	Canola	cytosol	33.52	21.05
PGSC0003DMT400041822	Potato	cytosol	36.31	20.25
Solyc11g009050.1.1	Tomato	cytosol	36.31	19.7
Bra038402.1-P	Field mustard	cytosol	34.64	19.56
CDY05035	Canola	cytosol	34.08	19.18
CDX90703	Canola	cytosol	34.08	19.18
Bra000662.1-P	Field mustard	cytosol	34.08	19.18
AT4G08980.2	Thale cress	cytosol	33.52	18.93
HORVU6Hr1G077670.2	Barley	cytosol, mitochondrion	35.75	17.78
HORVU1Hr1G011370.2	Barley	cytosol	21.23	10.33

Protein Annotations

EnsemblPlants:HORVU7Hr1G122060.1	EnsemblPlantsGene:HORVU7Hr1G122060	Gene3D:3.80.10.10	InterPro:IPR032675	InterPro:LRR_dom_sf	PANTHER:PTHR44841
PANTHER:PTHR44841:SF3	SUPFAM:SSF52047	UniParc:UPI000B4876C1	UniProt:A0A287Y213	MapMan:35.1	:

Description

No Description!

Coordinates

chrchr7H:-:655168932..655170309

Molecular Weight (calculated)

20094.7 Da

IEP (calculated)

9.261

GRAVY (calculated)

-0.048

Length

179 amino acids

Sequence
(BLAST)

001: MDANRTSVMH NIYNTLFIDD PIHIILLNLA DATMFAFAIA QSLDTLGIPR SEISDGLGED SAPRRPKVTF LHVSSYINYG ARALEAFGKN SKSLVKLHCV
101: MHPIIAVKAC QNDKAHAIVS NMSKLHHLKI RKMLIKTKVV LRISSECHDL KFIDLRGCRD VDDKLLEDKY PRLKTLGPC

Best Arabidopsis Sequence Match ( AT4G08980.1 )
(BLAST)

001: MEEDCEFRHW DELIPDALGL IFSHLPLQEV LTVVPRVCKA WNRAVTGPYC WQEIDIELWS NRFHQSDHLD RMLEMLIPRS AGSLRKLSVT GLRNDSIFSF
101: IAQHAGSLKT LKVPRSGLTN SGVVNVAEKL SSLTFLDLSY CCKIGPEAIQ AIGKHCKSLR EFCRNMHPLD VASVVSHDDE AYAIANTMPK LKRLEIAYHR
201: VSTEGVLKIL SCCVFLEFLE LRGCWDVQLD NKFFKEKFPD MKVLGPRVIG FYDMINDWED CCSDYFSDGS DYLAWEFFED GVMGEFYEDE FEHGWDDNFY
301: AENAVLDMEP HIWPPSP

Arabidopsis Description

FBW2FBW2 [Source:UniProtKB/TrEMBL;Acc:A0A178UUC5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.