CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH62319	Soybean	cytosol	97.82	97.82
AT4G08980.2	Thale cress	cytosol	58.26	58.99
VIT_18s0001g06220.t01	Wine grape	cytosol	53.58	58.9
CDY05035	Canola	cytosol	57.63	58.18
Bra038402.1-P	Field mustard	cytosol	57.32	58.04
CDX90703	Canola	cytosol	57.32	57.86
GSMUA_Achr3P06570_001	Banana	cytosol	57.63	57.63
Bra000662.1-P	Field mustard	cytosol	57.01	57.55
CDY51578	Canola	cytosol	50.78	56.6
GSMUA_Achr9P14880_001	Banana	cytosol	56.07	56.07
GSMUA_Achr6P30460_001	Banana	cytosol	56.39	56.04
CDX75124	Canola	cytosol	49.22	55.44
GSMUA_AchrUn_...	Banana	cytosol	53.27	53.27
TraesCS7D01G179800.1	Wheat	cytosol	51.4	51.08
TraesCS7B01G083700.1	Wheat	cytosol	51.09	50.77
TraesCS7A01G178000.1	Wheat	cytosol	51.09	50.46
Os06t0219700-01	Rice	cytosol	47.98	48.58
Os02t0757700-01	Rice	cytosol	48.91	48.46
Zm00001d052200_P001	Maize	cytosol	49.84	47.76
HORVU7Hr1G036660.5	Barley	cytosol	48.6	46.99
EES07216	Sorghum	cytosol, golgi, mitochondrion, plastid	50.78	44.66
TraesCS6B01G347000.1	Wheat	cytosol	45.48	44.65
Zm00001d018111_P002	Maize	cytosol	48.29	44.41
TraesCS3B01G550600.1	Wheat	cytosol	42.99	43.67
TraesCS6A01G316400.1	Wheat	cytosol	44.86	43.5
TraesCS3A01G490000.1	Wheat	cytosol, golgi, nucleus	43.93	41.96
HORVU7Hr1G122060.1	Barley	cytosol	21.81	39.11
HORVU6Hr1G077730.1	Barley	mitochondrion	30.53	38.58
TraesCS6D01G296000.1	Wheat	endoplasmic reticulum, golgi, mitochondrion	45.17	37.08
HORVU6Hr1G077670.2	Barley	cytosol, mitochondrion	41.43	36.94
HORVU3Hr1G108730.1	Barley	cytosol, golgi, mitochondrion	44.24	36.6
HORVU7Hr1G122300.1	Barley	mitochondrion	9.66	31.31
HORVU7Hr1G121910.1	Barley	cytosol	8.41	30.68
KRH72322	Soybean	cytosol	21.5	22.55

Protein Annotations

EMBL:ACUP02003445	EnsemblPlants:KRH53038	EnsemblPlantsGene:GLYMA_06G101800	EntrezGene:100305923	Gene3D:3.80.10.10	InterPro:IPR032675
InterPro:LRR_dom_sf	PANTHER:PTHR44841	PANTHER:PTHR44841:SF2	ProteinID:KRH53035.1	ProteinID:KRH53036.1	ProteinID:KRH53037.1
ProteinID:KRH53038	ProteinID:KRH53038.1	SEG:seg	SUPFAM:SSF52047	UniParc:UPI00023C2ED6	UniProt:I1K9W5
MapMan:19.2.2.8.1.4.6	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:-:8088383..8091391

Molecular Weight (calculated)

36413.4 Da

IEP (calculated)

4.289

GRAVY (calculated)

-0.177

Length

321 amino acids

Sequence
(BLAST)

001: MEEACEFRSW AELIPDALGV IFTNLSLQER VTVIPRVCKS WANAVTGPYC WQEIDIKDWS NRCQPDQLDR LLEMLITRSC GTLRKLSVSG LQTESIFTFI
101: AENACSLHTL RLPRSSMNDS IVEQIAGRLS MISFLDVSYC IKIGPYALEM IGKNCKLLEG LCRNMHPLDT AEKPHQDDEA YAIASTMPKL KHLEMAYHLI
201: STSGVLQILA NCPKLEFLDQ RGCWGVTLDH MFLKQKFPKL KVLGPLVLDT YESDGWDDFS DVSDSSEYLA WDFVAGGMGE YYVDDSDSYD GMWDDEARLD
301: ELQFGFYEGI EDAGMYWPPS P

Best Arabidopsis Sequence Match ( AT4G08980.3 )
(BLAST)

001: MEEDCEFRHW DELIPDALGL IFSHLPLQEV LTVVPRVCKA WNRAVTGPYC WQEIDIELWS NRFHQSDHLD RMLEMLIPRS AGSLRKLSVT GLRNDSIFSF
101: IAQHAGSLKT LKVPRSGLTN SGVVNVAEKL SSLTFLDLSY CCKIGPEAIQ AIGKHCKSLR EFCRNMHPLD VASVVSHDDE AYAIANTMPK LKRLEIAYHR
201: VSTEGVLKIL SCCVFLEFLE LRGCWDVQLD NKFFKEKFPD MKVLGPRVIG FYDMINDWED CCSDYFSDGS DYLAWEFFED GVMGEFYEDE FEHGWDDNFY
301: AENAVLDMEP HIWPPSP

Arabidopsis Description

FBW2FBW2 [Source:UniProtKB/TrEMBL;Acc:A0A178UUC5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.