Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS6A01G316400.1 | Wheat | cytosol | 90.21 | 89.12 |
TraesCS6D01G296000.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion | 96.64 | 80.82 |
HORVU6Hr1G077670.2 | Barley | cytosol, mitochondrion | 88.69 | 80.56 |
HORVU6Hr1G077730.1 | Barley | mitochondrion | 62.39 | 80.31 |
Os02t0757700-01 | Rice | cytosol | 77.37 | 78.09 |
Zm00001d052200_P001 | Maize | cytosol | 77.06 | 75.22 |
Zm00001d018111_P002 | Maize | cytosol | 74.62 | 69.91 |
TraesCS7B01G083700.1 | Wheat | cytosol | 67.58 | 68.42 |
EES07216 | Sorghum | cytosol, golgi, mitochondrion, plastid | 76.15 | 68.22 |
GSMUA_Achr6P30460_001 | Banana | cytosol | 59.02 | 59.75 |
GSMUA_Achr9P14880_001 | Banana | cytosol | 57.8 | 58.88 |
GSMUA_AchrUn_... | Banana | cytosol | 57.8 | 58.88 |
TraesCS3B01G550600.1 | Wheat | cytosol | 56.88 | 58.86 |
GSMUA_Achr3P06570_001 | Banana | cytosol | 57.49 | 58.57 |
VIT_00s0391g00040.t01 | Wine grape | cytosol | 49.85 | 51.42 |
PGSC0003DMT400041822 | Potato | cytosol | 49.85 | 50.78 |
VIT_18s0001g06220.t01 | Wine grape | cytosol | 44.34 | 49.66 |
Solyc11g009050.1.1 | Tomato | cytosol | 49.85 | 49.39 |
Bra000662.1-P | Field mustard | cytosol | 46.18 | 47.48 |
AT4G08980.2 | Thale cress | cytosol | 45.87 | 47.32 |
CDY05035 | Canola | cytosol | 45.87 | 47.17 |
CDX90703 | Canola | cytosol | 45.87 | 47.17 |
Bra038402.1-P | Field mustard | cytosol | 45.57 | 47.0 |
KRH62319 | Soybean | cytosol | 44.95 | 45.79 |
KRH53038 | Soybean | cytosol | 44.65 | 45.48 |
CDX75124 | Canola | cytosol | 39.45 | 45.26 |
CDY51578 | Canola | cytosol | 39.76 | 45.14 |
PGSC0003DMT400043293 | Potato | cytosol | 28.75 | 44.34 |
TraesCS1B01G073600.1 | Wheat | cytosol | 19.27 | 20.19 |
TraesCS2B01G334900.1 | Wheat | cytosol, nucleus, plastid | 24.46 | 19.37 |
Protein Annotations
EnsemblPlants:TraesCS6B01G347000.1 | EnsemblPlantsGene:TraesCS6B01G347000 | Gene3D:1.20.1280.50 | Gene3D:3.80.10.10 | InterPro:IPR032675 | InterPro:LRR_dom_sf |
PANTHER:PTHR44841 | PANTHER:PTHR44841:SF2 | SEG:seg | SUPFAM:SSF52047 | MapMan:19.2.2.8.1.4.6 | : |
Description
No Description!
Coordinates
chr6B:-:611348177..611349244
Molecular Weight (calculated)
36580.1 Da
IEP (calculated)
4.254
GRAVY (calculated)
-0.207
Length
327 amino acids
Sequence
(BLAST)
(BLAST)
001: MAESEYRCWE ELLPDALGLV FRNLPLQEVL TVVPRVCKSW GRVVAGPYCW QEIDIEEWSQ QRQSRPDQLV RMLDLLVRRS SGACRRISVS GLPCDPLFSF
101: IGDHARALRT LEIPRSEISD AVVEAVAPGL PNLTFLDISS CTKIGARALE AFGRHCRSLA ALRRVMHPID VAGRNACGQH DEARAIARTM PALRHLEVGY
201: MLVTTEAILE VLSRCRGLEF VDLRGCWAVD EALLRERHPG LSVLGPGVDD CFENSYWEEC SDDDDDSDDE VYSWELMDDD EYYGVVGSDD DEAVWGDGPG
301: LVENLEVRFY GGGFSESYAG FDWPASP
101: IGDHARALRT LEIPRSEISD AVVEAVAPGL PNLTFLDISS CTKIGARALE AFGRHCRSLA ALRRVMHPID VAGRNACGQH DEARAIARTM PALRHLEVGY
201: MLVTTEAILE VLSRCRGLEF VDLRGCWAVD EALLRERHPG LSVLGPGVDD CFENSYWEEC SDDDDDSDDE VYSWELMDDD EYYGVVGSDD DEAVWGDGPG
301: LVENLEVRFY GGGFSESYAG FDWPASP
001: MEEDCEFRHW DELIPDALGL IFSHLPLQEV LTVVPRVCKA WNRAVTGPYC WQEIDIELWS NRFHQSDHLD RMLEMLIPRS AGSLRKLSVT GLRNDSIFSF
101: IAQHAGSLKT LKVPRSGLTN SGVVNVAEKL SSLTFLDLSY CCKIGPEAIQ AIGKHCKSLR EFCRNMHPLD VASVVSHDDE AYAIANTMPK LKRLEIAYHR
201: VSTEGVLKIL SCCVFLEFLE LRGCWDVQLD NKFFKEKFPD MKVLGPRVIG FYDMINDWED CCSDYFSDGS DYLAWEFFED GVMGEFYEDE FEHGWDDNFY
301: AENAVLDMEP HIWPPSP
101: IAQHAGSLKT LKVPRSGLTN SGVVNVAEKL SSLTFLDLSY CCKIGPEAIQ AIGKHCKSLR EFCRNMHPLD VASVVSHDDE AYAIANTMPK LKRLEIAYHR
201: VSTEGVLKIL SCCVFLEFLE LRGCWDVQLD NKFFKEKFPD MKVLGPRVIG FYDMINDWED CCSDYFSDGS DYLAWEFFED GVMGEFYEDE FEHGWDDNFY
301: AENAVLDMEP HIWPPSP
Arabidopsis Description
FBW2FBW2 [Source:UniProtKB/TrEMBL;Acc:A0A178UUC5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.