Factsheet for HORVU6Hr1G077730.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
TargetP:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G316400.1	Wheat	cytosol	88.58	67.98
TraesCS6B01G347000.1	Wheat	cytosol	80.31	62.39
HORVU6Hr1G077670.2	Barley	cytosol, mitochondrion	81.89	57.78
Zm00001d052200_P001	Maize	cytosol	68.9	52.24
Os02t0757700-01	Rice	cytosol	66.14	51.85
TraesCS6D01G296000.1	Wheat	endoplasmic reticulum, golgi, mitochondrion	79.53	51.66
Zm00001d018111_P002	Maize	cytosol	69.69	50.72
EES07216	Sorghum	cytosol, golgi, mitochondrion, plastid	65.75	45.75
HORVU7Hr1G036660.5	Barley	cytosol	56.3	43.07
PGSC0003DMT400043293	Potato	cytosol	33.86	40.57
GSMUA_Achr6P30460_001	Banana	cytosol	51.57	40.56
GSMUA_Achr9P14880_001	Banana	cytosol	50.39	39.88
GSMUA_AchrUn_...	Banana	cytosol	50.39	39.88
HORVU7Hr1G122060.1	Barley	cytosol	27.95	39.66
GSMUA_Achr3P06570_001	Banana	cytosol	49.61	39.25
HORVU7Hr1G121910.1	Barley	cytosol	12.6	36.36
VIT_18s0001g06220.t01	Wine grape	cytosol	38.98	33.9
CDX75124	Canola	cytosol	37.8	33.68
VIT_00s0391g00040.t01	Wine grape	cytosol	41.73	33.44
CDY51578	Canola	cytosol	37.8	33.33
HORVU3Hr1G108730.1	Barley	cytosol, golgi, mitochondrion	50.79	33.25
PGSC0003DMT400041822	Potato	cytosol	40.55	32.09
Solyc11g009050.1.1	Tomato	cytosol	40.55	31.21
AT4G08980.2	Thale cress	cytosol	38.58	30.91
KRH62319	Soybean	cytosol	38.98	30.84
KRH53038	Soybean	cytosol	38.58	30.53
HORVU7Hr1G122300.1	Barley	mitochondrion	11.81	30.3
Bra038402.1-P	Field mustard	cytosol	37.8	30.28
CDY05035	Canola	cytosol	37.8	30.19
CDX90703	Canola	cytosol	37.8	30.19
Bra000662.1-P	Field mustard	cytosol	37.8	30.19
HORVU1Hr1G011370.2	Barley	cytosol	18.5	12.77

Protein Annotations

EnsemblPlants:HORVU6Hr1G077730.1	EnsemblPlantsGene:HORVU6Hr1G077730	Gene3D:3.80.10.10	InterPro:IPR032675	InterPro:LRR_dom_sf	PANTHER:PTHR44841
PANTHER:PTHR44841:SF2	SEG:seg	SUPFAM:SSF52047	UniParc:UPI000B48485F	UniProt:A0A287UT26	MapMan:19.2.2.8.1.4.6

Description

No Description!

Coordinates

chrchr6H:+:532057370..532058586

Molecular Weight (calculated)

26723.4 Da

IEP (calculated)

4.319

GRAVY (calculated)

-0.081

Length

254 amino acids

Sequence
(BLAST)

001: MVELLVRRSS GACRRISVSG LPCHPLFSFI GDHARALRTL EIPRSDISDA VVEAVAPGLP NLTFLDVSSC TKIGARALEA FGSHCRSLAA LRRVMHPIDV
101: AGRNACGQHD EARAIARTMP GLRHLEVGYM LVTTEAILEV LSRCRGLEFV DLRGCWAVDE ALLRERHPGL SVLGPAVDDC FENSYWEECS DDDDDDVYSW
201: ELMDDDEYYA VVGSDDDEAV WADGPGLVEN LEVRFYGGGF SESXXXXXXX XXXX

Best Arabidopsis Sequence Match ( AT4G08980.1 )
(BLAST)

001: MEEDCEFRHW DELIPDALGL IFSHLPLQEV LTVVPRVCKA WNRAVTGPYC WQEIDIELWS NRFHQSDHLD RMLEMLIPRS AGSLRKLSVT GLRNDSIFSF
101: IAQHAGSLKT LKVPRSGLTN SGVVNVAEKL SSLTFLDLSY CCKIGPEAIQ AIGKHCKSLR EFCRNMHPLD VASVVSHDDE AYAIANTMPK LKRLEIAYHR
201: VSTEGVLKIL SCCVFLEFLE LRGCWDVQLD NKFFKEKFPD MKVLGPRVIG FYDMINDWED CCSDYFSDGS DYLAWEFFED GVMGEFYEDE FEHGWDDNFY
301: AENAVLDMEP HIWPPSP

Arabidopsis Description

FBW2FBW2 [Source:UniProtKB/TrEMBL;Acc:A0A178UUC5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.