Factsheet for Os02t0757700-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d052200_P001	Maize	cytosol	81.48	78.81
Os06t0219700-01	Rice	cytosol	76.54	78.23
TraesCS6B01G347000.1	Wheat	cytosol	78.09	77.37
EES07216	Sorghum	cytosol, golgi, mitochondrion, plastid	84.88	75.34
Zm00001d018111_P002	Maize	cytosol	79.32	73.64
TraesCS6A01G316400.1	Wheat	cytosol	72.84	71.3
HORVU6Hr1G077730.1	Barley	mitochondrion	51.85	66.14
GSMUA_Achr6P30460_001	Banana	cytosol	64.51	64.71
GSMUA_Achr9P14880_001	Banana	cytosol	63.89	64.49
HORVU6Hr1G077670.2	Barley	cytosol, mitochondrion	71.3	64.17
GSMUA_AchrUn_...	Banana	cytosol	63.27	63.86
GSMUA_Achr3P06570_001	Banana	cytosol	62.96	63.55
TraesCS6D01G296000.1	Wheat	endoplasmic reticulum, golgi, mitochondrion	75.93	62.92
VIT_00s0391g00040.t01	Wine grape	cytosol	51.54	52.68
VIT_18s0001g06220.t01	Wine grape	cytosol	46.91	52.05
PGSC0003DMT400041822	Potato	cytosol	49.69	50.16
KRH53038	Soybean	cytosol	48.46	48.91
KRH62319	Soybean	cytosol	48.46	48.91
Solyc11g009050.1.1	Tomato	cytosol	49.69	48.79
AT4G08980.2	Thale cress	cytosol	46.91	47.95
Bra000662.1-P	Field mustard	cytosol	46.3	47.17
CDY05035	Canola	cytosol	45.99	46.86
CDX90703	Canola	cytosol	45.99	46.86
Bra038402.1-P	Field mustard	cytosol	45.68	46.69
PGSC0003DMT400043293	Potato	cytosol	29.94	45.75
CDY51578	Canola	cytosol	40.43	45.49
CDX75124	Canola	cytosol	39.51	44.91
Os04t0448700-00	Rice	mitochondrion	29.32	23.0
Os08t0269800-01	Rice	cytosol	9.26	19.35

Protein Annotations

EnsemblPlants:Os02t0757700-01	EnsemblPlantsGene:Os02g0757700	EntrezGene:4330783	Gene3D:1.20.1280.50	Gene3D:3.80.10.10	InterPro:IPR032675
InterPro:LRR_dom_sf	PANTHER:PTHR44841	PANTHER:PTHR44841:SF2	ProteinID:BAD17088.1	ProteinID:BAF10086.1	ProteinID:BAS81003.1
ProteinID:EAZ24682.1	RefSeq:XP_015627547.1	RefSeq:XP_015627548.1	SEG:seg	SUPFAM:SSF52047	UniParc:UPI000035ADDB
UniProt:Q6Z7V6	MapMan:19.2.2.8.1.4.6	:	:	:	:

Description

F-box protein 110Cyclin-like F-box domain containing protein. (Os02t0757700-01);Similar to Ubiquitin-protein ligase. (Os02t0757700-02)

Coordinates

chr2:+:31908947..31911623

Molecular Weight (calculated)

36371.1 Da

IEP (calculated)

4.390

GRAVY (calculated)

-0.254

Length

324 amino acids

Sequence
(BLAST)

001: MGECGGGEYR CWEELLPDAL GLVFRNLPLR EVLTVVPRVC KSWSRVVAGP YCWQEIDIEE WRQQQGKPEQ LVRMVEMLVA RSCGSCRRIS VSGLPGDPLF
101: SFIGDHARAL RTLEIPRSEI SDAAVESVAP RLPNVTFLDI SSCTKIGARA LEAFGKNCKS LVGLRRVMHP TDVAGKACQR DEARAIACTM PRLRHLEMGY
201: MVIATDAVLD ILARCRDLRF LDLRGCWAVD DKFLQERHPG LRVLGPGVDD CFENSYLEEC SDYSDDSSIY SWELMEDDDD DYYAVGSDDE AIWDDGQGLE
301: NLEVRFYGGG FSESYAGFDW PPSP

Best Arabidopsis Sequence Match ( AT4G08980.3 )
(BLAST)

001: MEEDCEFRHW DELIPDALGL IFSHLPLQEV LTVVPRVCKA WNRAVTGPYC WQEIDIELWS NRFHQSDHLD RMLEMLIPRS AGSLRKLSVT GLRNDSIFSF
101: IAQHAGSLKT LKVPRSGLTN SGVVNVAEKL SSLTFLDLSY CCKIGPEAIQ AIGKHCKSLR EFCRNMHPLD VASVVSHDDE AYAIANTMPK LKRLEIAYHR
201: VSTEGVLKIL SCCVFLEFLE LRGCWDVQLD NKFFKEKFPD MKVLGPRVIG FYDMINDWED CCSDYFSDGS DYLAWEFFED GVMGEFYEDE FEHGWDDNFY
301: AENAVLDMEP HIWPPSP

Arabidopsis Description

FBW2FBW2 [Source:UniProtKB/TrEMBL;Acc:A0A178UUC5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.