Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY51578 | Canola | cytosol | 96.14 | 95.14 |
| CDY05035 | Canola | cytosol | 91.93 | 82.39 |
| CDX90703 | Canola | cytosol | 90.88 | 81.45 |
| AT4G08980.2 | Thale cress | cytosol | 89.82 | 80.76 |
| KRH62319 | Soybean | cytosol | 56.14 | 49.84 |
| KRH53038 | Soybean | cytosol | 55.44 | 49.22 |
| VIT_18s0001g06220.t01 | Wine grape | cytosol | 48.77 | 47.6 |
| GSMUA_Achr6P30460_001 | Banana | cytosol | 50.88 | 44.89 |
| GSMUA_Achr9P14880_001 | Banana | cytosol | 48.77 | 43.3 |
| GSMUA_Achr3P06570_001 | Banana | cytosol | 48.77 | 43.3 |
| GSMUA_AchrUn_... | Banana | cytosol | 48.42 | 42.99 |
| TraesCS7D01G179800.1 | Wheat | cytosol | 47.37 | 41.8 |
| TraesCS7B01G083700.1 | Wheat | cytosol | 47.02 | 41.49 |
| TraesCS7A01G178000.1 | Wheat | cytosol | 47.02 | 41.23 |
| Os06t0219700-01 | Rice | cytosol | 45.26 | 40.69 |
| Zm00001d052200_P001 | Maize | cytosol | 47.02 | 40.0 |
| Os02t0757700-01 | Rice | cytosol | 44.91 | 39.51 |
| TraesCS6B01G347000.1 | Wheat | cytosol | 45.26 | 39.45 |
| TraesCS6A01G316400.1 | Wheat | cytosol | 45.26 | 38.97 |
| HORVU7Hr1G036660.5 | Barley | cytosol | 44.91 | 38.55 |
| TraesCS3B01G550600.1 | Wheat | cytosol | 42.46 | 38.29 |
| HORVU6Hr1G077730.1 | Barley | mitochondrion | 33.68 | 37.8 |
| Zm00001d018111_P002 | Maize | cytosol | 45.96 | 37.54 |
| EES07216 | Sorghum | cytosol, golgi, mitochondrion, plastid | 47.37 | 36.99 |
| TraesCS3A01G490000.1 | Wheat | cytosol, golgi, nucleus | 43.51 | 36.9 |
| HORVU7Hr1G122060.1 | Barley | cytosol | 21.05 | 33.52 |
| TraesCS6D01G296000.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion | 45.26 | 32.99 |
| HORVU6Hr1G077670.2 | Barley | cytosol, mitochondrion | 40.7 | 32.22 |
| HORVU3Hr1G108730.1 | Barley | cytosol, golgi, mitochondrion | 42.11 | 30.93 |
| HORVU7Hr1G122300.1 | Barley | mitochondrion | 9.47 | 27.27 |
| HORVU7Hr1G121910.1 | Barley | cytosol | 8.07 | 26.14 |
| CDY51272 | Canola | cytosol | 22.11 | 21.0 |
| CDY57461 | Canola | cytosol | 21.75 | 20.67 |
| CDX72259 | Canola | cytosol | 15.09 | 20.57 |
| CDY39233 | Canola | cytosol | 20.0 | 20.5 |
| CDX72258 | Canola | cytosol | 20.0 | 20.28 |
| CDX68681 | Canola | cytosol | 19.65 | 19.24 |
| CDY28199 | Canola | cytosol | 19.3 | 19.03 |
| CDY39231 | Canola | cytosol | 14.39 | 18.98 |
| CDX72257 | Canola | cytosol | 18.25 | 18.64 |
| CDY39226 | Canola | cytosol | 17.89 | 18.28 |
| CDY23249 | Canola | cytosol | 17.19 | 17.82 |
| CDX68676 | Canola | mitochondrion | 8.07 | 17.04 |
| CDY39232 | Canola | cytosol | 1.4 | 16.67 |
| CDY55615 | Canola | cytosol | 13.68 | 16.12 |
| CDY49309 | Canola | cytosol | 14.39 | 16.02 |
| CDX68675 | Canola | cytosol | 7.37 | 12.5 |
| CDY13002 | Canola | nucleus | 8.77 | 9.88 |
Protein Annotations
| EnsemblPlants:CDX75124 | EnsemblPlantsGene:GSBRNA2T00118859001 | Gene3D:3.80.10.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR001611 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | PANTHER:PTHR44841 | PANTHER:PTHR44841:SF2 |
| PFAM:PF13516 | ProteinID:CDX75124 | ProteinID:CDX75124.1 | SUPFAM:SSF52047 | UniParc:UPI0004EE2BEF | MapMan:19.2.2.8.1.4.6 |
Description
BnaC09g25580D
Coordinates
chrLK031803:-:570340..571484
Molecular Weight (calculated)
32595.0 Da
IEP (calculated)
4.867
GRAVY (calculated)
-0.199
Length
285 amino acids
Sequence
(BLAST)
(BLAST)
001: MEENCKLRNW DELIPDALGL IFSHLPLQEV LTVVPRSDHL DRMLQLLINR SSGSLRKLSV TGLQNDSIFS FIAQHAGSLK TLKVPRSCLS NSGVVNVAEK
101: LSSLTFLDLS YCCKLGPEAI QAMGKHCKSL TEFSRNMHPL DVASVVSHDD EAYAIARTMP KLKRLEIAYH RVSVEGVLKI LSSCIFLQFL ELRGCWDVQL
201: DNKFFKEKFP DMKVLGPRVI GFYDMINDWE DCCSDYFSDG SDYLAWEFLE DGEMGEYEFE HGWDDNFYAD RVNIDREPHI WPPSP
101: LSSLTFLDLS YCCKLGPEAI QAMGKHCKSL TEFSRNMHPL DVASVVSHDD EAYAIARTMP KLKRLEIAYH RVSVEGVLKI LSSCIFLQFL ELRGCWDVQL
201: DNKFFKEKFP DMKVLGPRVI GFYDMINDWE DCCSDYFSDG SDYLAWEFLE DGEMGEYEFE HGWDDNFYAD RVNIDREPHI WPPSP
001: MEEDCEFRHW DELIPDALGL IFSHLPLQEV LTVVPRVCKA WNRAVTGPYC WQEIDIELWS NRFHQSDHLD RMLEMLIPRS AGSLRKLSVT GLRNDSIFSF
101: IAQHAGSLKT LKVPRSGLTN SGVVNVAEKL SSLTFLDLSY CCKIGPEAIQ AIGKHCKSLR EFCRNMHPLD VASVVSHDDE AYAIANTMPK LKRLEIAYHR
201: VSTEGVLKIL SCCVFLEFLE LRGCWDVQLD NKFFKEKFPD MKVLGPRVIG FYDMINDWED CCSDYFSDGS DYLAWEFFED GVMGEFYEDE FEHGWDDNFY
301: AENAVLDMEP HIWPPSP
101: IAQHAGSLKT LKVPRSGLTN SGVVNVAEKL SSLTFLDLSY CCKIGPEAIQ AIGKHCKSLR EFCRNMHPLD VASVVSHDDE AYAIANTMPK LKRLEIAYHR
201: VSTEGVLKIL SCCVFLEFLE LRGCWDVQLD NKFFKEKFPD MKVLGPRVIG FYDMINDWED CCSDYFSDGS DYLAWEFFED GVMGEFYEDE FEHGWDDNFY
301: AENAVLDMEP HIWPPSP
Arabidopsis Description
FBW2FBW2 [Source:UniProtKB/TrEMBL;Acc:A0A178UUC5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.