Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX68681 | Canola | cytosol | 69.44 | 71.82 |
| Bra011207.1-P | Field mustard | cytosol | 67.77 | 65.81 |
| CDY28199 | Canola | cytosol | 63.12 | 65.74 |
| VIT_11s0037g00430.t01 | Wine grape | cytosol | 52.82 | 51.62 |
| KRH72322 | Soybean | cytosol | 49.83 | 49.02 |
| AT5G57900.1 | Thale cress | cytosol | 48.84 | 49.0 |
| PGSC0003DMT400028954 | Potato | cytosol | 42.52 | 41.56 |
| GSMUA_Achr4P20480_001 | Banana | cytosol | 43.19 | 41.4 |
| Solyc07g005750.2.1 | Tomato | cytosol | 41.86 | 40.38 |
| EES14834 | Sorghum | cytosol | 40.2 | 38.29 |
| Zm00001d050166_P001 | Maize | cytosol, extracellular | 40.2 | 38.29 |
| TraesCS1B01G073600.1 | Wheat | cytosol | 38.54 | 37.18 |
| TraesCS1D01G057200.3 | Wheat | cytosol | 37.54 | 36.1 |
| Os08t0269800-01 | Rice | cytosol | 17.28 | 33.55 |
| TraesCS1A01G056500.2 | Wheat | cytosol | 37.54 | 32.19 |
| HORVU1Hr1G011370.2 | Barley | cytosol | 37.54 | 30.71 |
| AT4G08980.2 | Thale cress | cytosol | 20.93 | 19.87 |
Protein Annotations
| Gene3D:1.20.1280.50 | MapMan:19.2.2.8.1.4.1 | Gene3D:3.80.10.10 | EntrezGene:829187 | UniProt:A0A178V2W7 | ProteinID:AEE85789.1 |
| ArrayExpress:AT4G30640 | EnsemblPlantsGene:AT4G30640 | RefSeq:AT4G30640 | TAIR:AT4G30640 | RefSeq:AT4G30640-TAIR-G | EnsemblPlants:AT4G30640.1 |
| TAIR:AT4G30640.1 | ProteinID:CAB79782.1 | InterPro:F-box-like_dom_sf | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt_Cys-con_subtyp | RefSeq:NP_567849.1 | ProteinID:OAO99694.1 | PO:PO:0000293 |
| PO:PO:0009005 | PANTHER:PTHR44078 | PANTHER:PTHR44078:SF5 | UniProt:Q9M096 | SMART:SM00367 | SUPFAM:SSF52047 |
| SUPFAM:SSF81383 | UniParc:UPI00000A776C | : | : | : | : |
Description
FBL19Putative F-box/LRR-repeat protein 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9M096]
Coordinates
chr4:+:14952591..14953849
Molecular Weight (calculated)
34306.3 Da
IEP (calculated)
5.853
GRAVY (calculated)
-0.316
Length
301 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVNGGEGKV EMGSGLYPDW SELTRECLLD IFSRLSQEQR WIGPMLVSKN WMNACYDPTL NTIFDLETRF LSFPESINWW TPEFEDKVDS FLRSVVDRSE
101: GGLTEIRIRH CTERSLSYAA ERCPNLEVLW IKNCPNVTDA SMEKIAMNCP NLRELDISYS YGITHESLIT LGRSCQNLKI LKRNLLPRLG PSLPTIVAPL
201: DYLATFPRYG NIEARIIGKY MTQLKHLEIR YSTLTARGLD SVCKGCSNLE YMDLRGCISL TRSDINTNTS GLKNLTEIIK PDFNPPIAVL RVPRPGNPRE
301: E
101: GGLTEIRIRH CTERSLSYAA ERCPNLEVLW IKNCPNVTDA SMEKIAMNCP NLRELDISYS YGITHESLIT LGRSCQNLKI LKRNLLPRLG PSLPTIVAPL
201: DYLATFPRYG NIEARIIGKY MTQLKHLEIR YSTLTARGLD SVCKGCSNLE YMDLRGCISL TRSDINTNTS GLKNLTEIIK PDFNPPIAVL RVPRPGNPRE
301: E
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.