Factsheet for Os05t0553400-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P09280_001	Banana	nucleus	35.99	54.17
Os01t0685400-01	Rice	nucleus	35.29	43.59
Os01t0191900-01	Rice	nucleus	32.53	35.61
Os03t0771100-01	Rice	nucleus	39.1	35.2
Os01t0722300-01	Rice	nucleus	35.29	34.23
Os08t0102050-00	Rice	nucleus	5.54	34.04
Os08t0248700-01	Rice	nucleus	37.02	33.86
Os12t0633501-00	Rice	mitochondrion	11.76	31.48
Os03t0296000-00	Rice	nucleus	10.03	28.16
Os02t0786400-00	Rice	extracellular	41.18	27.29
Os09t0431300-00	Rice	nucleus	38.41	24.94

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	EntrezGene:4339548	ProteinID:AAT58725.1	ProteinID:AAT85200.1	ProteinID:BAF18177.1
ProteinID:BAS95240.1	ProteinID:EEE64625.1	GO:GO:0000981	GO:GO:0001135	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006357	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0030154	GO:GO:0043565	GO:GO:0044212	InterPro:Homeobox-like_sf	InterPro:IPR017930
InterPro:Myb_dom	EnsemblPlantsGene:Os05g0553400	EnsemblPlants:Os05t0553400-01	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641
PANTHER:PTHR10641:SF694	UniProt:Q6I634	InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI00003B338B
RefSeq:XP_015637875.1	SEG:seg	:	:	:	:

Description

R2R3-MYB Transcription Factor 55, R2R3-MYB Transcription Factor OsMYB55Similar to Myb-related transcription factor-like protein (MYB transcription factor). (Os05t0553400-01)

Coordinates

chr5:-:27524786..27526242

Molecular Weight (calculated)

30552.8 Da

IEP (calculated)

6.493

GRAVY (calculated)

-0.299

Length

289 amino acids

Sequence
(BLAST)

001: MGRAPCCDKA SVKRGPWSPE EDEQLRSYVQ SHGIGGNWIA LPQKAGLNRC GKSCRLRWLN YLRPDIKHGG YTEQEDHIIC SLYNSIGSRW SIIASKLPGR
101: TDNDVKNYWN TKLKKKAMGA VQPRAAASAP SQCTSSAMAP ALSPASSSVT SSSGDACFAA AATTTTTMYP PPTTPPQQQF IRFDAPPAAA AAASPTDLAP
201: VPPPATVTAD GDGGWASDAL SLDDVFLGEL TAGEPLFPYA ELFSGFAGAA PDSKATLELS ACYFPNMAEM WAASDHAYAK PQGLCNTLT

Best Arabidopsis Sequence Match ( AT5G57620.1 )
(BLAST)

001: MGRAPCCDKA NVKKGPWSPE EDVKLKDYID KYGTGGNWIA LPQKIGLKRC GKSCRLRWLN YLRPNIKHGG FSEEEDRIIL SLYISIGSRW SIIAAQLPGR
101: TDNDIKNYWN TKLKKKLLGR QKQMNRQDSI TDSTENNLSN NNNNKSPQNL SNSALERLQL HMQLQNLQSP FSSFYNNPIL WPKLHPLLQS TTTNQNPKLA
201: SQESFHPLGV NVDHQHNNTK LAQINNGASS LYSENVEQSQ NPAHEFQPNF GFSQDLRLDN HNMDFMNRGV SKELFQVGNE FELTNGSSWW SEEVELERKT
301: TSSSSWGSAS VLDQTTEGMV MLQDYAQMSY HSV

Arabidopsis Description

MYB36Transcription factor MYB36 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKL2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.