Factsheet for Os08t0248700-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G061220.1	Barley	nucleus	70.89	70.66
TraesCS1D01G252300.1	Wheat	nucleus	45.25	70.44
TraesCS1B01G265400.1	Wheat	nucleus	70.57	70.13
TraesCS1A01G252600.1	Wheat	nucleus	70.89	69.78
EES14801	Sorghum	nucleus	70.57	69.69
Zm00001d050185_P002	Maize	nucleus	67.72	64.07
GSMUA_Achr7P19530_001	Banana	nucleus	44.62	41.35
VIT_11s0052g01490.t01	Wine grape	nucleus	47.47	41.1
Os08t0102050-00	Rice	nucleus	6.01	40.43
Bra020428.1-P	Field mustard	nucleus	42.41	40.36
CDY25898	Canola	nucleus	40.82	39.81
AT5G57620.1	Thale cress	nucleus	41.46	39.34
Bra006811.1-P	Field mustard	nucleus	41.14	39.27
CDX88631	Canola	nucleus	41.14	39.27
CDY11860	Canola	nucleus	41.46	39.22
Os03t0771100-01	Rice	nucleus	38.29	37.69
Os05t0553400-01	Rice	nucleus	33.86	37.02
Os01t0191900-01	Rice	nucleus	29.11	34.85
Os12t0633501-00	Rice	mitochondrion	11.39	33.33
Os02t0786400-00	Rice	extracellular	44.62	32.34
Os03t0296000-00	Rice	nucleus	10.44	32.04
Os01t0722300-01	Rice	nucleus	30.06	31.88
Os09t0431300-00	Rice	nucleus	43.35	30.79
Os01t0685400-01	Rice	nucleus	13.61	18.38

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	EntrezGene:4345070	EMBL:AK111788	ProteinID:BAD05679.1	ProteinID:BAF23280.1
ProteinID:BAT04545.1	GO:GO:0000981	GO:GO:0001135	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006357	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0030154	GO:GO:0043565	GO:GO:0044212	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom
EnsemblPlantsGene:Os08g0248700	EnsemblPlants:Os08t0248700-01	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF946
UniProt:Q6Z0A5	InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI000022F2D0	RefSeq:XP_015648313.1
SEG:seg	:	:	:	:	:

Description

Similar to Blind. (Os08t0248700-01)

Coordinates

chr8:+:9069082..9070671

Molecular Weight (calculated)

34399.1 Da

IEP (calculated)

6.314

GRAVY (calculated)

-0.644

Length

316 amino acids

Sequence
(BLAST)

001: MGRAPCCDKA TVKKGPWSPE EDAMLKNYIE EHGTGGNWIA LPHKIGLKRC GKSCRLRWLN YLRPNIKHGD FTPEEDSIIC SLYISIGSRW SIIAAQLPGR
101: TDNDVKNYWN TKLKKRLLGR RKDRGGGHHH RSQSTADDLP AGGDGGMNDG GGGGGERSLS ASAMERIQLC MQLQELQNPL SIHHNPLLSH QWPSKATIDD
201: QNHNNVTVAE HGMSSSVSDH HRLDGQQLES GAGAAAMQQA SPSSGGENSN VVVAIEAELQ ELLYAGGGAI VDGGAPPQGD VDWWSYDQGK QSPVTCWDFT
301: PETSSIFQDY ATVYDI

Best Arabidopsis Sequence Match ( AT5G57620.1 )
(BLAST)

001: MGRAPCCDKA NVKKGPWSPE EDVKLKDYID KYGTGGNWIA LPQKIGLKRC GKSCRLRWLN YLRPNIKHGG FSEEEDRIIL SLYISIGSRW SIIAAQLPGR
101: TDNDIKNYWN TKLKKKLLGR QKQMNRQDSI TDSTENNLSN NNNNKSPQNL SNSALERLQL HMQLQNLQSP FSSFYNNPIL WPKLHPLLQS TTTNQNPKLA
201: SQESFHPLGV NVDHQHNNTK LAQINNGASS LYSENVEQSQ NPAHEFQPNF GFSQDLRLDN HNMDFMNRGV SKELFQVGNE FELTNGSSWW SEEVELERKT
301: TSSSSWGSAS VLDQTTEGMV MLQDYAQMSY HSV

Arabidopsis Description

MYB36Transcription factor MYB36 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKL2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.