Factsheet for Os03t0296000-00

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os08t0102050-00	Rice	nucleus	20.39	44.68
TraesCS4D01G192400.1	Wheat	nucleus	85.44	28.57
TraesCS4B01G191200.1	Wheat	nucleus	83.5	27.92
TraesCS4A01G113000.1	Wheat	nucleus	82.52	27.69
HORVU4Hr1G055680.1	Barley	nucleus	78.64	26.82
OQU92760	Sorghum	nucleus	83.5	26.22
Zm00001d028777_P001	Maize	nucleus	80.58	26.02
Solyc03g059200.1.1	Tomato	nucleus	46.6	18.25
PGSC0003DMT400022009	Potato	nucleus	46.6	16.38
GSMUA_Achr3P10060_001	Banana	nucleus	48.54	15.62
VIT_17s0000g05400.t01	Wine grape	nucleus	41.75	14.05
Bra025337.1-P	Field mustard	nucleus	43.69	13.93
CDX86430	Canola	nucleus	43.69	13.93
AT3G28470.1	Thale cress	nucleus	41.75	13.56
KRG93460	Soybean	nucleus	43.69	13.04
KRH18536	Soybean	endoplasmic reticulum	44.66	12.27
VIT_14s0066g02180.t01	Wine grape	nucleus	50.49	11.93
Os01t0191900-01	Rice	nucleus	30.1	11.74
KRH63439	Soybean	nucleus	30.1	11.65
Os03t0771100-01	Rice	nucleus	33.01	10.59
Os08t0248700-01	Rice	nucleus	32.04	10.44
Os05t0553400-01	Rice	nucleus	28.16	10.03
Os01t0722300-01	Rice	nucleus	28.16	9.73
KRH54481	Soybean	nucleus	27.18	8.48
Os02t0786400-00	Rice	extracellular	33.98	8.03
Solyc03g113530.2.1	Tomato	nucleus	27.18	7.89
Os09t0431300-00	Rice	nucleus	33.98	7.87
CDX85201	Canola	endoplasmic reticulum, vacuole	42.72	6.73
Os12t0633501-00	Rice	mitochondrion	4.85	4.63
PGSC0003DMT400062839	Potato	nucleus	7.77	2.61
Os01t0685400-01	Rice	nucleus	4.85	2.14

Protein Annotations

Gene3D:1.10.10.60	MapMan:35.2	UniProt:A0A0P0VX49	ProteinID:BAS83720.1	GO:GO:0000981	GO:GO:0001135
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006357	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0030154	GO:GO:0043565	GO:GO:0044212
InterPro:Homeobox-like_sf	EnsemblPlantsGene:Os03g0296000	EnsemblPlants:Os03t0296000-00	PFAM:PF00249	PANTHER:PTHR10641	PANTHER:PTHR10641:SF653
InterPro:SANT/Myb	SUPFAM:SSF46689	UniParc:UPI000393AA45	SEG:seg	:	:

Description

Similar to DNA binding protein. (Os03t0296000-00)

Coordinates

chr3:-:10362997..10365264

Molecular Weight (calculated)

10429.0 Da

IEP (calculated)

4.127

GRAVY (calculated)

-0.265

Length

103 amino acids

Sequence
(BLAST)

001: MGRPPCCDKA NVKKGPWTAE EDAKLLAYTS THGTGNWTSV PQRAAGVGAG TDDGAGAASA FIDAILDCDK EMGVDQLIAE MLADPAYYGG GGGSSSSELG
101: WGC

Best Arabidopsis Sequence Match ( AT3G28470.1 )
(BLAST)

001: MGRPPCCDKS NVKKGLWTEE EDAKILAYVA IHGVGNWSLI PKKAGLNRCG KSCRLRWTNY LRPDLKHDSF STQEEELIIE CHRAIGSRWS SIARKLPGRT
101: DNDVKNHWNT KLKKKLMKMG IDPVTHKPVS QLLAEFRNIS GHGNASFKTE PSNNSILTQS NSAWEMMRNT TTNHESYYTN SPMMFTNSSE YQTTPFHFYS
201: HPNHLLNGTT SSCSSSSSST SITQPNQVPQ TPVTNFYWSD FLLSDPVPQV VGSSATSDLT FTQNEHHFNI EAEYISQNID SKASGTCHSA SSFVDEILDK
301: DQEMLSQFPQ LLNDFDY

Arabidopsis Description

MYB35Transcription factor MYB35 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSI7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.