Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os03t0296000-00 | Rice | nucleus | 15.62 | 48.54 |
| Solyc03g059200.1.1 | Tomato | nucleus | 38.44 | 46.77 |
| GSMUA_Achr5P09280_001 | Banana | nucleus | 26.88 | 44.79 |
| TraesCS4D01G192400.1 | Wheat | nucleus | 42.81 | 44.48 |
| TraesCS4B01G191200.1 | Wheat | nucleus | 42.5 | 44.16 |
| TraesCS4A01G113000.1 | Wheat | nucleus | 41.88 | 43.65 |
| VIT_17s0000g05400.t01 | Wine grape | nucleus | 41.56 | 43.46 |
| HORVU4Hr1G055680.1 | Barley | nucleus | 40.94 | 43.38 |
| Zm00001d028777_P001 | Maize | nucleus | 43.12 | 43.26 |
| PGSC0003DMT400022009 | Potato | nucleus | 39.38 | 43.0 |
| KRG93460 | Soybean | nucleus | 45.31 | 42.03 |
| OQU92760 | Sorghum | nucleus | 42.5 | 41.46 |
| AT3G28470.1 | Thale cress | nucleus | 40.31 | 40.69 |
| GSMUA_Achr5P21840_001 | Banana | nucleus | 25.31 | 39.13 |
| KRH63439 | Soybean | nucleus | 32.5 | 39.1 |
| Bra025337.1-P | Field mustard | nucleus | 39.06 | 38.7 |
| CDX86430 | Canola | nucleus | 39.06 | 38.7 |
| GSMUA_Achr4P01050_001 | Banana | nucleus | 26.88 | 38.05 |
| KRH18536 | Soybean | endoplasmic reticulum | 44.38 | 37.87 |
| GSMUA_Achr4P28090_001 | Banana | nucleus | 26.25 | 37.17 |
| GSMUA_Achr1P04910_001 | Banana | nucleus | 28.12 | 37.04 |
| GSMUA_Achr10P... | Banana | nucleus | 29.06 | 34.7 |
| GSMUA_Achr7P08150_001 | Banana | nucleus | 27.5 | 34.38 |
| GSMUA_Achr1P03140_001 | Banana | nucleus | 27.19 | 34.25 |
| GSMUA_Achr11P... | Banana | nucleus | 27.5 | 33.72 |
| GSMUA_Achr9P09790_001 | Banana | nucleus | 27.5 | 33.46 |
| GSMUA_AchrUn_... | Banana | nucleus | 28.44 | 33.33 |
| VIT_14s0066g02180.t01 | Wine grape | nucleus | 45.31 | 33.26 |
| GSMUA_Achr4P25260_001 | Banana | nucleus | 28.75 | 32.97 |
| GSMUA_Achr7P25060_001 | Banana | nucleus | 30.0 | 32.88 |
| GSMUA_Achr5P10690_001 | Banana | nucleus | 27.81 | 31.9 |
| GSMUA_Achr5P01930_001 | Banana | nucleus | 27.5 | 31.32 |
| KRH54481 | Soybean | nucleus | 32.19 | 31.21 |
| GSMUA_Achr4P32240_001 | Banana | nucleus | 27.19 | 31.18 |
| GSMUA_Achr2P04200_001 | Banana | nucleus | 29.06 | 30.9 |
| GSMUA_Achr8P24780_001 | Banana | nucleus | 29.38 | 30.62 |
| GSMUA_Achr5P22760_001 | Banana | nucleus | 30.0 | 30.38 |
| GSMUA_Achr8P14190_001 | Banana | nucleus | 29.38 | 30.03 |
| GSMUA_Achr6P30830_001 | Banana | nucleus | 29.38 | 29.84 |
| GSMUA_Achr6P01850_001 | Banana | nucleus | 30.0 | 28.83 |
| GSMUA_Achr9P13610_001 | Banana | nucleus | 27.19 | 28.06 |
| GSMUA_Achr6P31740_001 | Banana | nucleus | 29.38 | 28.06 |
| Solyc03g113530.2.1 | Tomato | nucleus | 30.62 | 27.61 |
| GSMUA_Achr7P19530_001 | Banana | nucleus | 28.75 | 26.98 |
| PGSC0003DMT400062839 | Potato | nucleus | 23.12 | 24.1 |
| CDX85201 | Canola | endoplasmic reticulum, vacuole | 38.44 | 18.81 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0009791 | GO:GO:0009908 | GO:GO:0048658 | GO:GO:0052545 | GO:GO:0055046 |
| EnsemblPlantsGene:GSMUA_Achr3G10060_001 | EnsemblPlants:GSMUA_Achr3P10060_001 | EnsemblPlants:GSMUA_Achr3T10060_001 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | UniProt:M0SDC3 |
| InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF716 | InterPro:SANT/Myb |
| SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0002961A7C | SEG:seg | : | : |
Description
MYB family transcription factor, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr3G10060_001]
Coordinates
chr3:+:7278997..7280631
Molecular Weight (calculated)
35346.2 Da
IEP (calculated)
8.466
GRAVY (calculated)
-0.578
Length
320 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRPPCCDKS TVKRGLWTAE EDAKLLAYTS THGTGNWTTV PKKAGLKRCG KSCRLRWTNY LRPNLKHEGF TLEEEERIVA LHATIGSRWS IIANQLPGRT
101: DNDVKNYWNT KLSKKLCQKG IDPVTHRPIS EIIQSIEHLQ HETAAAAASR FNSNFRYKPA TAGARIGCLN RDLRSVFLSR PAPTVNSASG SSSSPNLNLF
201: AQTQVGSPIP TYFSPSEASS SSTAATTPKA TQPPSSPEFK WTDFLIEDDD DAYAKNKAKE VVTWSDVAAK HNAAVDEGTS HRAGACYGSS SFVDAILEQE
301: RELVSKFYEE FLSYPNDLPW
101: DNDVKNYWNT KLSKKLCQKG IDPVTHRPIS EIIQSIEHLQ HETAAAAASR FNSNFRYKPA TAGARIGCLN RDLRSVFLSR PAPTVNSASG SSSSPNLNLF
201: AQTQVGSPIP TYFSPSEASS SSTAATTPKA TQPPSSPEFK WTDFLIEDDD DAYAKNKAKE VVTWSDVAAK HNAAVDEGTS HRAGACYGSS SFVDAILEQE
301: RELVSKFYEE FLSYPNDLPW
001: MGRPPCCDKS NVKKGLWTEE EDAKILAYVA IHGVGNWSLI PKKAGLNRCG KSCRLRWTNY LRPDLKHDSF STQEEELIIE CHRAIGSRWS SIARKLPGRT
101: DNDVKNHWNT KLKKKLMKMG IDPVTHKPVS QLLAEFRNIS GHGNASFKTE PSNNSILTQS NSAWEMMRNT TTNHESYYTN SPMMFTNSSE YQTTPFHFYS
201: HPNHLLNGTT SSCSSSSSST SITQPNQVPQ TPVTNFYWSD FLLSDPVPQV VGSSATSDLT FTQNEHHFNI EAEYISQNID SKASGTCHSA SSFVDEILDK
301: DQEMLSQFPQ LLNDFDY
101: DNDVKNHWNT KLKKKLMKMG IDPVTHKPVS QLLAEFRNIS GHGNASFKTE PSNNSILTQS NSAWEMMRNT TTNHESYYTN SPMMFTNSSE YQTTPFHFYS
201: HPNHLLNGTT SSCSSSSSST SITQPNQVPQ TPVTNFYWSD FLLSDPVPQV VGSSATSDLT FTQNEHHFNI EAEYISQNID SKASGTCHSA SSFVDEILDK
301: DQEMLSQFPQ LLNDFDY
Arabidopsis Description
MYB35Transcription factor MYB35 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSI7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.