Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P21840_001 | Banana | nucleus | 42.26 | 63.28 |
| GSMUA_Achr5P09280_001 | Banana | nucleus | 32.58 | 52.6 |
| GSMUA_Achr4P28090_001 | Banana | nucleus | 35.16 | 48.23 |
| GSMUA_Achr1P03140_001 | Banana | nucleus | 37.1 | 45.28 |
| GSMUA_Achr4P01050_001 | Banana | nucleus | 32.58 | 44.69 |
| GSMUA_Achr5P22760_001 | Banana | nucleus | 44.84 | 43.99 |
| GSMUA_Achr9P09790_001 | Banana | nucleus | 35.81 | 42.21 |
| AT5G57620.1 | Thale cress | nucleus | 45.16 | 42.04 |
| Bra020428.1-P | Field mustard | nucleus | 44.84 | 41.87 |
| Bra006811.1-P | Field mustard | nucleus | 44.52 | 41.69 |
| CDX88631 | Canola | nucleus | 44.52 | 41.69 |
| CDY25898 | Canola | nucleus | 43.55 | 41.67 |
| CDY11860 | Canola | nucleus | 44.84 | 41.62 |
| GSMUA_Achr6P30830_001 | Banana | nucleus | 41.61 | 40.95 |
| GSMUA_Achr5P01930_001 | Banana | nucleus | 37.1 | 40.93 |
| GSMUA_Achr11P... | Banana | nucleus | 34.19 | 40.61 |
| GSMUA_Achr1P04910_001 | Banana | nucleus | 31.61 | 40.33 |
| GSMUA_Achr10P... | Banana | nucleus | 34.84 | 40.3 |
| GSMUA_Achr8P24780_001 | Banana | nucleus | 39.68 | 40.07 |
| GSMUA_AchrUn_... | Banana | nucleus | 35.16 | 39.93 |
| GSMUA_Achr4P25260_001 | Banana | nucleus | 35.81 | 39.78 |
| GSMUA_Achr4P32240_001 | Banana | nucleus | 35.81 | 39.78 |
| GSMUA_Achr5P10690_001 | Banana | nucleus | 35.16 | 39.07 |
| GSMUA_Achr7P08150_001 | Banana | nucleus | 32.26 | 39.06 |
| GSMUA_Achr7P19530_001 | Banana | nucleus | 42.58 | 38.71 |
| GSMUA_Achr2P04200_001 | Banana | nucleus | 36.77 | 37.87 |
| VIT_11s0052g01490.t01 | Wine grape | nucleus | 44.19 | 37.53 |
| GSMUA_Achr8P14190_001 | Banana | nucleus | 36.45 | 36.1 |
| GSMUA_Achr6P01850_001 | Banana | nucleus | 37.74 | 35.14 |
| GSMUA_Achr7P25060_001 | Banana | nucleus | 32.58 | 34.59 |
| GSMUA_Achr6P31740_001 | Banana | nucleus | 36.77 | 34.03 |
| GSMUA_Achr3P10060_001 | Banana | nucleus | 28.06 | 27.19 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr9P13610_001 | EnsemblPlants:GSMUA_Achr9T13610_001 | EnsemblPlantsGene:GSMUA_Achr9G13610_001 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF946 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 |
| SUPFAM:SSF46689 | UniParc:UPI000296F970 | UniProt:M0U019 | MapMan:15.5.2.1 | : | : |
Description
MYB transcription factor MYB71 (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr9G13610_001]
Coordinates
chr9:-:8869646..8871030
Molecular Weight (calculated)
34873.1 Da
IEP (calculated)
6.976
GRAVY (calculated)
-0.696
Length
310 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRAPCCDKA NVKKGPWSPE EDTILKAYIE EHGTGGNWIA LPHKIGLKRC GKSCRLRWLN YLRPNIKHGD FSEEEDFIIC SLFISIGSRW SIIAAQLPGR
101: TDNDIKNHWN TKLKKKLLGK KREPLQHRRV HATQQPSNDK PPPAVTSSAL ERIQLHMHLQ SLHNPFSFYH NPAQWPDYHA LGESNFQSHN MDDMAKAQAL
201: GDMAAYQAKL DMRNTAIQEE MDCSTLGFRS PPDSIGAPST DRSSASSNPL EPATGCKLYG SCDYNQTNVE AEIMDSWDCN GFSEDTSGLW DLTAVIHADS
301: MLQEYMKGRQ
101: TDNDIKNHWN TKLKKKLLGK KREPLQHRRV HATQQPSNDK PPPAVTSSAL ERIQLHMHLQ SLHNPFSFYH NPAQWPDYHA LGESNFQSHN MDDMAKAQAL
201: GDMAAYQAKL DMRNTAIQEE MDCSTLGFRS PPDSIGAPST DRSSASSNPL EPATGCKLYG SCDYNQTNVE AEIMDSWDCN GFSEDTSGLW DLTAVIHADS
301: MLQEYMKGRQ
001: MGRAPCCDKA NVKKGPWSPE EDVKLKDYID KYGTGGNWIA LPQKIGLKRC GKSCRLRWLN YLRPNIKHGG FSEEEDRIIL SLYISIGSRW SIIAAQLPGR
101: TDNDIKNYWN TKLKKKLLGR QKQMNRQDSI TDSTENNLSN NNNNKSPQNL SNSALERLQL HMQLQNLQSP FSSFYNNPIL WPKLHPLLQS TTTNQNPKLA
201: SQESFHPLGV NVDHQHNNTK LAQINNGASS LYSENVEQSQ NPAHEFQPNF GFSQDLRLDN HNMDFMNRGV SKELFQVGNE FELTNGSSWW SEEVELERKT
301: TSSSSWGSAS VLDQTTEGMV MLQDYAQMSY HSV
101: TDNDIKNYWN TKLKKKLLGR QKQMNRQDSI TDSTENNLSN NNNNKSPQNL SNSALERLQL HMQLQNLQSP FSSFYNNPIL WPKLHPLLQS TTTNQNPKLA
201: SQESFHPLGV NVDHQHNNTK LAQINNGASS LYSENVEQSQ NPAHEFQPNF GFSQDLRLDN HNMDFMNRGV SKELFQVGNE FELTNGSSWW SEEVELERKT
301: TSSSSWGSAS VLDQTTEGMV MLQDYAQMSY HSV
Arabidopsis Description
MYB36Transcription factor MYB36 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKL2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.