Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P19530_001 | Banana | nucleus | 71.52 | 66.28 |
| GSMUA_Achr8P24780_001 | Banana | nucleus | 59.81 | 61.56 |
| GSMUA_Achr5P21840_001 | Banana | nucleus | 36.71 | 56.04 |
| GSMUA_Achr5P09280_001 | Banana | nucleus | 33.86 | 55.73 |
| GSMUA_Achr4P28090_001 | Banana | nucleus | 36.39 | 50.88 |
| GSMUA_Achr4P01050_001 | Banana | nucleus | 34.18 | 47.79 |
| GSMUA_Achr9P13610_001 | Banana | nucleus | 43.99 | 44.84 |
| GSMUA_Achr1P03140_001 | Banana | nucleus | 35.76 | 44.49 |
| GSMUA_Achr6P30830_001 | Banana | nucleus | 43.99 | 44.13 |
| GSMUA_Achr9P09790_001 | Banana | nucleus | 36.71 | 44.11 |
| GSMUA_Achr4P32240_001 | Banana | nucleus | 38.61 | 43.73 |
| GSMUA_Achr7P08150_001 | Banana | nucleus | 34.49 | 42.58 |
| GSMUA_Achr10P... | Banana | nucleus | 36.08 | 42.54 |
| GSMUA_Achr1P04910_001 | Banana | nucleus | 32.59 | 42.39 |
| CDY25898 | Canola | nucleus | 43.35 | 42.28 |
| CDY11860 | Canola | nucleus | 44.62 | 42.22 |
| GSMUA_AchrUn_... | Banana | nucleus | 36.39 | 42.12 |
| Bra020428.1-P | Field mustard | nucleus | 43.99 | 41.87 |
| CDX88631 | Canola | nucleus | 43.67 | 41.69 |
| Bra006811.1-P | Field mustard | nucleus | 43.67 | 41.69 |
| GSMUA_Achr5P01930_001 | Banana | nucleus | 37.03 | 41.64 |
| GSMUA_Achr6P01850_001 | Banana | nucleus | 43.67 | 41.44 |
| AT5G57620.1 | Thale cress | nucleus | 43.35 | 41.14 |
| GSMUA_Achr11P... | Banana | nucleus | 33.86 | 41.0 |
| GSMUA_Achr4P25260_001 | Banana | nucleus | 35.13 | 39.78 |
| VIT_11s0052g01490.t01 | Wine grape | nucleus | 45.89 | 39.73 |
| GSMUA_Achr5P10690_001 | Banana | nucleus | 34.18 | 38.71 |
| GSMUA_Achr2P04200_001 | Banana | nucleus | 36.08 | 37.87 |
| GSMUA_Achr7P25060_001 | Banana | nucleus | 34.18 | 36.99 |
| GSMUA_Achr8P14190_001 | Banana | nucleus | 36.08 | 36.42 |
| GSMUA_Achr6P31740_001 | Banana | nucleus | 38.29 | 36.12 |
| GSMUA_Achr3P10060_001 | Banana | nucleus | 30.38 | 30.0 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr5P22760_001 | EnsemblPlants:GSMUA_Achr5T22760_001 | EnsemblPlantsGene:GSMUA_Achr5G22760_001 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF946 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 |
| SUPFAM:SSF46689 | UniParc:UPI0002959B75 | UniProt:M0T0V1 | MapMan:15.5.2.1 | : | : |
Description
MYB family transcription factor, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr5G22760_001]
Coordinates
chr5:+:24681383..24682858
Molecular Weight (calculated)
35110.2 Da
IEP (calculated)
7.043
GRAVY (calculated)
-0.656
Length
316 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRAPCCDKA NVKKGPWSPE EDAKLKAYIE EHGTGGNWIA LPHKIGLKRC GKSCRLRWLN YLRPNIKHGG FTEEEDQIIC SLYISIGSRW SIIAAQLPGR
101: TDNDIKNYWN TRLKKKLLGK RRQSAQSPSL HLNQAAGEGA NGVNHEAPSQ TLSASALERL QLHMQFQGLY HPFSFHNHPA RQPKCHPPGD PTATTLIQQV
201: SPPKPDAGHL QEIDCSSVGF HSPSAMETSS SNLDAGLEAD LQDLLYCKNS SSFVGHEEHQ LANLDYYKDL YGERETANWC PCNGLEDQSS SMGSWDSASA
301: LHSDAMIQEF ALRYNL
101: TDNDIKNYWN TRLKKKLLGK RRQSAQSPSL HLNQAAGEGA NGVNHEAPSQ TLSASALERL QLHMQFQGLY HPFSFHNHPA RQPKCHPPGD PTATTLIQQV
201: SPPKPDAGHL QEIDCSSVGF HSPSAMETSS SNLDAGLEAD LQDLLYCKNS SSFVGHEEHQ LANLDYYKDL YGERETANWC PCNGLEDQSS SMGSWDSASA
301: LHSDAMIQEF ALRYNL
001: MGRAPCCDKA NVKKGPWSPE EDVKLKDYID KYGTGGNWIA LPQKIGLKRC GKSCRLRWLN YLRPNIKHGG FSEEEDRIIL SLYISIGSRW SIIAAQLPGR
101: TDNDIKNYWN TKLKKKLLGR QKQMNRQDSI TDSTENNLSN NNNNKSPQNL SNSALERLQL HMQLQNLQSP FSSFYNNPIL WPKLHPLLQS TTTNQNPKLA
201: SQESFHPLGV NVDHQHNNTK LAQINNGASS LYSENVEQSQ NPAHEFQPNF GFSQDLRLDN HNMDFMNRGV SKELFQVGNE FELTNGSSWW SEEVELERKT
301: TSSSSWGSAS VLDQTTEGMV MLQDYAQMSY HSV
101: TDNDIKNYWN TKLKKKLLGR QKQMNRQDSI TDSTENNLSN NNNNKSPQNL SNSALERLQL HMQLQNLQSP FSSFYNNPIL WPKLHPLLQS TTTNQNPKLA
201: SQESFHPLGV NVDHQHNNTK LAQINNGASS LYSENVEQSQ NPAHEFQPNF GFSQDLRLDN HNMDFMNRGV SKELFQVGNE FELTNGSSWW SEEVELERKT
301: TSSSSWGSAS VLDQTTEGMV MLQDYAQMSY HSV
Arabidopsis Description
MYB36Transcription factor MYB36 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKL2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.