Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY11860 | Canola | nucleus | 88.89 | 86.23 |
| CDX88631 | Canola | nucleus | 87.96 | 86.1 |
| AT5G57620.1 | Thale cress | nucleus | 87.96 | 85.59 |
| Zm00001d018319_P001 | Maize | nucleus | 23.46 | 84.44 |
| CDY08749 | Canola | nucleus | 12.96 | 82.35 |
| KRH18986 | Soybean | nucleus | 54.32 | 48.62 |
| KRH02902 | Soybean | nucleus | 54.63 | 48.49 |
| GSMUA_Achr9P13610_001 | Banana | nucleus | 41.67 | 43.55 |
| GSMUA_Achr5P22760_001 | Banana | nucleus | 42.28 | 43.35 |
| VIT_11s0052g01490.t01 | Wine grape | nucleus | 46.6 | 41.37 |
| GSMUA_Achr8P24780_001 | Banana | nucleus | 38.89 | 41.04 |
| TraesCS1D01G252300.1 | Wheat | nucleus | 25.62 | 40.89 |
| Os08t0248700-01 | Rice | nucleus | 39.81 | 40.82 |
| HORVU1Hr1G061220.1 | Barley | nucleus | 39.81 | 40.69 |
| TraesCS1B01G265400.1 | Wheat | nucleus | 39.81 | 40.57 |
| TraesCS1A01G252600.1 | Wheat | nucleus | 39.51 | 39.88 |
| GSMUA_Achr7P19530_001 | Banana | nucleus | 41.36 | 39.3 |
| PGSC0003DMT400009926 | Potato | nucleus | 36.11 | 39.0 |
| CDY08162 | Canola | nucleus | 36.11 | 39.0 |
| Solyc09g008250.2.1 | Tomato | nucleus | 35.19 | 38.51 |
| EES14801 | Sorghum | nucleus | 37.96 | 38.44 |
| CDX69328 | Canola | nucleus | 36.11 | 38.36 |
| CDY65680 | Canola | nucleus | 35.49 | 38.33 |
| PGSC0003DMT400005085 | Potato | nucleus | 35.49 | 38.33 |
| CDX75005 | Canola | nucleus | 33.95 | 38.19 |
| CDY33205 | Canola | nucleus | 33.95 | 38.19 |
| CDY46743 | Canola | nucleus | 33.64 | 37.72 |
| CDX79698 | Canola | nucleus | 33.33 | 37.37 |
| HORVU5Hr1G063410.1 | Barley | nucleus | 33.95 | 36.54 |
| CDY60980 | Canola | nucleus | 35.19 | 36.31 |
| Zm00001d050185_P002 | Maize | nucleus | 37.35 | 36.23 |
| TraesCS5B01G216900.1 | Wheat | nucleus | 34.26 | 36.16 |
| CDY18676 | Canola | nucleus | 34.88 | 35.99 |
| TraesCS5A01G217900.1 | Wheat | nucleus | 34.26 | 35.92 |
| HORVU6Hr1G083250.1 | Barley | nucleus | 40.12 | 35.81 |
| TraesCS6B01G377400.1 | Wheat | nucleus | 40.12 | 35.71 |
| TraesCS6D01G327300.1 | Wheat | nucleus | 40.12 | 35.62 |
| TraesCS6A01G344700.1 | Wheat | nucleus | 40.12 | 35.62 |
| TraesCS5D01G225800.1 | Wheat | nucleus | 34.57 | 35.44 |
| CDY64987 | Canola | nucleus | 25.0 | 33.89 |
| CDY50326 | Canola | nucleus | 34.57 | 33.53 |
| CDY09184 | Canola | nucleus | 33.95 | 33.43 |
| CDY26977 | Canola | nucleus | 34.88 | 33.24 |
| CDY52538 | Canola | nucleus | 37.04 | 32.52 |
| CDY37840 | Canola | nucleus | 37.04 | 32.34 |
| CDY45629 | Canola | nucleus | 36.73 | 32.34 |
| CDY08748 | Canola | nucleus | 36.73 | 32.34 |
| Zm00001d052069_P001 | Maize | nucleus | 39.2 | 32.07 |
| Zm00001d005784_P001 | Maize | nucleus | 33.95 | 31.79 |
| EES05913 | Sorghum | nucleus | 39.51 | 31.76 |
| EER98942 | Sorghum | nucleus | 35.49 | 31.17 |
| Zm00001d020569_P001 | Maize | nucleus | 34.88 | 30.62 |
| Os02t0786400-00 | Rice | extracellular | 39.2 | 29.13 |
| CDY17391 | Canola | nucleus | 26.23 | 26.56 |
| CDY57424 | Canola | nucleus | 25.93 | 26.25 |
| Os09t0431300-00 | Rice | nucleus | 35.8 | 26.07 |
| CDX86430 | Canola | nucleus | 25.93 | 26.01 |
| CDX85201 | Canola | endoplasmic reticulum, vacuole | 25.62 | 12.69 |
| CDY40299 | Canola | nucleus | 4.32 | 7.0 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:A0A078GMQ9 | UniProt:A0A078GMQ9 | EnsemblPlants:CDY25898 | ProteinID:CDY25898 |
| ProteinID:CDY25898.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00033371001 |
| InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF928 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EE086B | SEG:seg |
Description
BnaC09g32700DBnaC09g32700D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GMQ9]
Coordinates
chrLK032182:-:216146..217741
Molecular Weight (calculated)
36746.3 Da
IEP (calculated)
7.844
GRAVY (calculated)
-0.708
Length
324 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRAPCCDKA NVKKGPWSPE EDGKLKDYID KYGTGGNWIA LPQKIGLKRC GKSCRLRWLN YLRPNIKHGG FSEEEDSIIL RLYISIGSRW SIIAAQLPGR
101: TDNDIKNYWN TKLKKKMLGR QKQMNCQDSL TDSNENTISN NNNKSPQILS NSALERLQLH MQIQNLQSPF SSFYNNPILW PKFHPLLQNT TTIPDQNAKL
201: ASQESFHPLG VNVHQNNSIK LAEINNGVSP VYSENVEQSL NPAQGFHPNC GFSQDLQLDN GSKELFLVSN DFEITNSSRW WSEEVELERK TTSSSPWGSA
301: SVLDQTTEGM VMLQDYAQMS YHSM
101: TDNDIKNYWN TKLKKKMLGR QKQMNCQDSL TDSNENTISN NNNKSPQILS NSALERLQLH MQIQNLQSPF SSFYNNPILW PKFHPLLQNT TTIPDQNAKL
201: ASQESFHPLG VNVHQNNSIK LAEINNGVSP VYSENVEQSL NPAQGFHPNC GFSQDLQLDN GSKELFLVSN DFEITNSSRW WSEEVELERK TTSSSPWGSA
301: SVLDQTTEGM VMLQDYAQMS YHSM
001: MGRAPCCDKA NVKKGPWSPE EDVKLKDYID KYGTGGNWIA LPQKIGLKRC GKSCRLRWLN YLRPNIKHGG FSEEEDRIIL SLYISIGSRW SIIAAQLPGR
101: TDNDIKNYWN TKLKKKLLGR QKQMNRQDSI TDSTENNLSN NNNNKSPQNL SNSALERLQL HMQLQNLQSP FSSFYNNPIL WPKLHPLLQS TTTNQNPKLA
201: SQESFHPLGV NVDHQHNNTK LAQINNGASS LYSENVEQSQ NPAHEFQPNF GFSQDLRLDN HNMDFMNRGV SKELFQVGNE FELTNGSSWW SEEVELERKT
301: TSSSSWGSAS VLDQTTEGMV MLQDYAQMSY HSV
101: TDNDIKNYWN TKLKKKLLGR QKQMNRQDSI TDSTENNLSN NNNNKSPQNL SNSALERLQL HMQLQNLQSP FSSFYNNPIL WPKLHPLLQS TTTNQNPKLA
201: SQESFHPLGV NVDHQHNNTK LAQINNGASS LYSENVEQSQ NPAHEFQPNF GFSQDLRLDN HNMDFMNRGV SKELFQVGNE FELTNGSSWW SEEVELERKT
301: TSSSSWGSAS VLDQTTEGMV MLQDYAQMSY HSV
Arabidopsis Description
MYB36Transcription factor MYB36 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKL2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.