Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER98942 | Sorghum | nucleus | 88.35 | 88.35 |
| Zm00001d005784_P001 | Maize | nucleus | 79.95 | 85.26 |
| Zm00001d018319_P001 | Maize | nucleus | 19.78 | 81.11 |
| TraesCS5B01G216900.1 | Wheat | nucleus | 54.2 | 65.15 |
| TraesCS5A01G217900.1 | Wheat | nucleus | 54.47 | 65.05 |
| HORVU5Hr1G063410.1 | Barley | nucleus | 52.85 | 64.78 |
| TraesCS5D01G225800.1 | Wheat | nucleus | 54.47 | 63.61 |
| Os09t0431300-00 | Rice | nucleus | 58.27 | 48.31 |
| Zm00001d050185_P002 | Maize | nucleus | 39.57 | 43.71 |
| Zm00001d038930_P001 | Maize | nucleus | 28.18 | 39.69 |
| Zm00001d039496_P001 | Maize | nucleus | 26.56 | 39.2 |
| VIT_11s0052g01490.t01 | Wine grape | nucleus | 37.67 | 38.08 |
| GSMUA_Achr7P19530_001 | Banana | nucleus | 33.88 | 36.66 |
| Zm00001d034207_P001 | Maize | nucleus | 31.17 | 36.62 |
| Zm00001d052069_P001 | Maize | nucleus | 38.75 | 36.11 |
| Bra020428.1-P | Field mustard | nucleus | 31.71 | 35.24 |
| AT5G57620.1 | Thale cress | nucleus | 31.71 | 35.14 |
| Zm00001d005307_P001 | Maize | nucleus | 27.91 | 34.92 |
| CDY25898 | Canola | nucleus | 30.62 | 34.88 |
| CDX88631 | Canola | nucleus | 31.17 | 34.74 |
| Bra006811.1-P | Field mustard | nucleus | 31.17 | 34.74 |
| CDY11860 | Canola | nucleus | 31.44 | 34.73 |
| Zm00001d043837_P001 | Maize | nucleus | 29.27 | 33.75 |
| Zm00001d013164_P002 | Maize | nucleus | 31.44 | 33.14 |
| Zm00001d011614_P001 | Maize | nucleus | 28.73 | 32.52 |
| Zm00001d004126_P001 | Maize | nucleus | 31.44 | 32.22 |
| Zm00001d011739_P001 | Maize | nucleus | 23.31 | 29.66 |
| Zm00001d013931_P001 | Maize | nucleus | 21.14 | 28.57 |
| Zm00001d028777_P001 | Maize | nucleus | 23.85 | 27.59 |
| Zm00001d043611_P001 | Maize | nucleus | 23.58 | 27.53 |
| Zm00001d025664_P001 | Maize | nucleus | 23.04 | 23.88 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100382127 | MapMan:15.5.2.1 | EMBL:BT063260 | UniProt:C0P4P1 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom |
| ProteinID:ONM55141.1 | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF946 | InterPro:SANT/Myb |
| SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0001949049 | EnsemblPlantsGene:Zm00001d020569 | EnsemblPlants:Zm00001d020569_P001 | EnsemblPlants:Zm00001d020569_T001 |
| SEG:seg | : | : | : | : | : |
Description
MYB-transcription factor 140Transcription factor MYB36
Coordinates
chr7:-:122618970..122620761
Molecular Weight (calculated)
39809.5 Da
IEP (calculated)
7.537
GRAVY (calculated)
-0.499
Length
369 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRAPCCDKA TVKKGPWAPE EDAVLKAYID EHGAGGNWIQ LPHKIGLNRC GKSCRLRWLN YLRPNIRHGG FTEEEDRLIC NLYISIGGRW ATIAAQLPGR
101: TDNDVKNHWN TKLKRRLLGG GRRPRAEARL QLLTTSPFWQ HRDSLASSAA ALERMQVSTR LHRRHQPRLD DPAAAAAAFT LYNNYGSLGA PLWPSLLSPS
201: SSPSPAASET SEILPRQPPP GTGATSTGYV YSAGGLWTHM PGSFGYAGAR VVRQENMDGT CTPPLSTSTT GETMTTAVGV ESSSSTPTAS SASATFGGSM
301: DDEIDMLLRQ IQCFGENGSH IGDDGIDHCF RATDHHETAN GSVGSWGSCC STPGVDSVFH DYVQGHNQC
101: TDNDVKNHWN TKLKRRLLGG GRRPRAEARL QLLTTSPFWQ HRDSLASSAA ALERMQVSTR LHRRHQPRLD DPAAAAAAFT LYNNYGSLGA PLWPSLLSPS
201: SSPSPAASET SEILPRQPPP GTGATSTGYV YSAGGLWTHM PGSFGYAGAR VVRQENMDGT CTPPLSTSTT GETMTTAVGV ESSSSTPTAS SASATFGGSM
301: DDEIDMLLRQ IQCFGENGSH IGDDGIDHCF RATDHHETAN GSVGSWGSCC STPGVDSVFH DYVQGHNQC
001: MGRAPCCDKA NVKRGPWSPE EDAKLKDYIE KQGTGGNWIA LPHKAGLRRC GKSCRLRWLN YLRPNIRHGD FTEEEDNIIY SLFASIGSRW SVIAAHLQGR
101: TDNDIKNYWN TKLKKKLIAT MAPPPHHHLA IATSSSSASP SSSSHYNMIN SLLPYNPSTN QLLTPHQGIM MTMMGQQQQL FYQEDMGNLV NSPNRNNLIM
201: SHQEDNQEQS TNKGIMLLSD VRSGSSTTST VTRVKMEHRD HDDHHHHHEE DERSMTSVVM EDYGMEEIKQ LISSSCTSSN NSLWFDENKT EDKFMLYY
101: TDNDIKNYWN TKLKKKLIAT MAPPPHHHLA IATSSSSASP SSSSHYNMIN SLLPYNPSTN QLLTPHQGIM MTMMGQQQQL FYQEDMGNLV NSPNRNNLIM
201: SHQEDNQEQS TNKGIMLLSD VRSGSSTTST VTRVKMEHRD HDDHHHHHEE DERSMTSVVM EDYGMEEIKQ LISSSCTSSN NSLWFDENKT EDKFMLYY
Arabidopsis Description
RAX2Duplicated homeodomain-like superfamily protein [Source:TAIR;Acc:AT2G36890]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.