Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d018319_P001 | Maize | nucleus | 22.29 | 86.67 |
| Zm00001d034207_P001 | Maize | nucleus | 76.0 | 84.71 |
| EER90818 | Sorghum | nucleus | 78.86 | 84.4 |
| TraesCS5D01G415800.1 | Wheat | nucleus | 66.0 | 74.28 |
| TraesCS5A01G405800.1 | Wheat | nucleus | 65.71 | 73.95 |
| TraesCS5B01G410500.1 | Wheat | nucleus | 65.43 | 73.63 |
| HORVU5Hr1G098540.1 | Barley | nucleus | 65.14 | 73.31 |
| Os03t0771100-01 | Rice | nucleus | 66.57 | 72.59 |
| GSMUA_Achr5P21840_001 | Banana | nucleus | 30.57 | 51.69 |
| GSMUA_Achr4P28090_001 | Banana | nucleus | 32.57 | 50.44 |
| GSMUA_Achr10P... | Banana | nucleus | 37.14 | 48.51 |
| PGSC0003DMT400012702 | Potato | nucleus | 44.57 | 47.42 |
| Solyc04g077260.2.1 | Tomato | nucleus | 44.0 | 47.38 |
| GSMUA_Achr9P09790_001 | Banana | nucleus | 34.0 | 45.25 |
| GSMUA_Achr4P32240_001 | Banana | nucleus | 35.43 | 44.44 |
| GSMUA_Achr5P01930_001 | Banana | nucleus | 35.43 | 44.13 |
| Zm00001d038930_P001 | Maize | nucleus | 31.43 | 41.98 |
| GSMUA_Achr7P08150_001 | Banana | nucleus | 30.29 | 41.41 |
| CDX69328 | Canola | nucleus | 35.71 | 40.98 |
| Bra011785.1-P | Field mustard | nucleus | 35.71 | 40.98 |
| AT4G37780.1 | Thale cress | nucleus | 34.86 | 40.0 |
| GSMUA_Achr6P31740_001 | Banana | nucleus | 38.0 | 39.7 |
| Zm00001d005307_P001 | Maize | nucleus | 33.14 | 39.32 |
| KRH28317 | Soybean | nucleus | 38.86 | 39.08 |
| Solyc02g091980.1.1 | Tomato | nucleus | 36.57 | 38.79 |
| PGSC0003DMT400055148 | Potato | nucleus | 36.29 | 38.48 |
| Zm00001d039496_P001 | Maize | nucleus | 27.43 | 38.4 |
| KRH77168 | Soybean | nucleus | 37.71 | 38.04 |
| KRH04372 | Soybean | nucleus | 36.57 | 37.76 |
| GSMUA_Achr6P01850_001 | Banana | nucleus | 35.43 | 37.24 |
| KRH58168 | Soybean | nucleus | 35.14 | 36.72 |
| Zm00001d050185_P002 | Maize | nucleus | 34.57 | 36.23 |
| Zm00001d043837_P001 | Maize | nucleus | 30.86 | 33.75 |
| Zm00001d011614_P001 | Maize | nucleus | 30.86 | 33.13 |
| Zm00001d052069_P001 | Maize | nucleus | 36.86 | 32.58 |
| Zm00001d005784_P001 | Maize | nucleus | 31.14 | 31.5 |
| Zm00001d020569_P001 | Maize | nucleus | 33.14 | 31.44 |
| Zm00001d004126_P001 | Maize | nucleus | 32.0 | 31.11 |
| Zm00001d011739_P001 | Maize | nucleus | 24.86 | 30.0 |
| Zm00001d043611_P001 | Maize | nucleus | 26.86 | 29.75 |
| Zm00001d028777_P001 | Maize | nucleus | 25.71 | 28.21 |
| Zm00001d013931_P001 | Maize | nucleus | 21.71 | 27.84 |
| Zm00001d025664_P001 | Maize | nucleus | 25.14 | 24.72 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | EntrezGene:541755 | UniProt:A0A1D6GGA5 | ProteinID:AQK62584.1 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom |
| PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF928 | InterPro:SANT/Myb | SMART:SM00717 |
| SUPFAM:SSF46689 | UniParc:UPI0002218682 | EnsemblPlantsGene:Zm00001d013164 | EnsemblPlants:Zm00001d013164_P002 | EnsemblPlants:Zm00001d013164_T002 | SEG:seg |
Description
MYB-transcription factor 12R2R3MYB-domain protein
Coordinates
chr5:+:5673628..5677335
Molecular Weight (calculated)
37584.7 Da
IEP (calculated)
8.007
GRAVY (calculated)
-0.379
Length
350 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRAPCCDKA TVKKGPWSPE EDAKLKSYIE QNGTGGNWIA LPQKIGLKRC GKSCRLRWLN YLRPNIKHGG FSDEEDMIIL SLYISIGSRW SIIAAQLPGR
101: TDNDIKNYWN TRLKKKLFGK QSRNKDQRQQ HQFMRQLAGS AASDGMVKQE AAAGGDADAA AAGSSSVAVA ATYNWHHHAM AMAMPVQPVP GSTTIMEGHR
201: AEADEVDESI RKLLYKLGGA AGPSTALSSV PQCVRPMYEE RSAASLMPPP PPPPSCPAVV DASSSASLDE GGGVLPALEL DQSFHFGQVK LDGLESFFGM
301: GGQSGMRWWS EASPLVCPSS TVAAASSSSH GMQMQQYCVV VDEPGKLGMN
101: TDNDIKNYWN TRLKKKLFGK QSRNKDQRQQ HQFMRQLAGS AASDGMVKQE AAAGGDADAA AAGSSSVAVA ATYNWHHHAM AMAMPVQPVP GSTTIMEGHR
201: AEADEVDESI RKLLYKLGGA AGPSTALSSV PQCVRPMYEE RSAASLMPPP PPPPSCPAVV DASSSASLDE GGGVLPALEL DQSFHFGQVK LDGLESFFGM
301: GGQSGMRWWS EASPLVCPSS TVAAASSSSH GMQMQQYCVV VDEPGKLGMN
001: MGRAPCCDKA NVKKGPWSPE EDVKLKDYID KYGTGGNWIA LPQKIGLKRC GKSCRLRWLN YLRPNIKHGG FSEEEDRIIL SLYISIGSRW SIIAAQLPGR
101: TDNDIKNYWN TKLKKKLLGR QKQMNRQDSI TDSTENNLSN NNNNKSPQNL SNSALERLQL HMQLQNLQSP FSSFYNNPIL WPKLHPLLQS TTTNQNPKLA
201: SQESFHPLGV NVDHQHNNTK LAQINNGASS LYSENVEQSQ NPAHEFQPNF GFSQDLRLDN HNMDFMNRGV SKELFQVGNE FELTNGSSWW SEEVELERKT
301: TSSSSWGSAS VLDQTTEGMV MLQDYAQMSY HSV
101: TDNDIKNYWN TKLKKKLLGR QKQMNRQDSI TDSTENNLSN NNNNKSPQNL SNSALERLQL HMQLQNLQSP FSSFYNNPIL WPKLHPLLQS TTTNQNPKLA
201: SQESFHPLGV NVDHQHNNTK LAQINNGASS LYSENVEQSQ NPAHEFQPNF GFSQDLRLDN HNMDFMNRGV SKELFQVGNE FELTNGSSWW SEEVELERKT
301: TSSSSWGSAS VLDQTTEGMV MLQDYAQMSY HSV
Arabidopsis Description
MYB36Transcription factor MYB36 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKL2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.