Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG38237 | Sorghum | nucleus | 74.36 | 79.3 |
| TraesCS1A01G169400.1 | Wheat | nucleus | 58.24 | 54.08 |
| HORVU1Hr1G045090.1 | Barley | nucleus | 58.24 | 53.0 |
| TraesCS1D01G204500.1 | Wheat | nucleus | 46.52 | 51.0 |
| HORVU1Hr1G051980.2 | Barley | nucleus | 45.79 | 50.61 |
| TraesCS1B01G215500.1 | Wheat | nucleus | 47.62 | 50.19 |
| TraesCS1A01G201100.1 | Wheat | nucleus | 47.99 | 50.19 |
| Zm00001d018319_P001 | Maize | nucleus | 15.02 | 45.56 |
| GSMUA_Achr4P01050_001 | Banana | nucleus | 25.27 | 30.53 |
| GSMUA_Achr1P04910_001 | Banana | nucleus | 26.01 | 29.22 |
| Zm00001d038930_P001 | Maize | nucleus | 26.74 | 27.86 |
| VIT_04s0008g00620.t01 | Wine grape | nucleus | 26.74 | 27.65 |
| Zm00001d039496_P001 | Maize | nucleus | 24.91 | 27.2 |
| GSMUA_Achr7P25060_001 | Banana | nucleus | 26.01 | 24.32 |
| Zm00001d034207_P001 | Maize | nucleus | 27.84 | 24.2 |
| Zm00001d005307_P001 | Maize | nucleus | 26.01 | 24.07 |
| KRH15488 | Soybean | nucleus | 26.37 | 23.84 |
| Zm00001d043837_P001 | Maize | nucleus | 27.47 | 23.44 |
| KRH05529 | Soybean | nucleus | 26.37 | 23.3 |
| Zm00001d011739_P001 | Maize | nucleus | 24.18 | 22.76 |
| Zm00001d050185_P002 | Maize | nucleus | 27.84 | 22.75 |
| Zm00001d011614_P001 | Maize | nucleus | 26.74 | 22.39 |
| Zm00001d005784_P001 | Maize | nucleus | 28.21 | 22.25 |
| Zm00001d013164_P002 | Maize | nucleus | 27.84 | 21.71 |
| Zm00001d043611_P001 | Maize | nucleus | 24.91 | 21.52 |
| Zm00001d020569_P001 | Maize | nucleus | 28.57 | 21.14 |
| Zm00001d004126_P001 | Maize | nucleus | 26.37 | 20.0 |
| Zm00001d052069_P001 | Maize | nucleus | 27.84 | 19.19 |
| Zm00001d025664_P001 | Maize | nucleus | 23.81 | 18.26 |
| Zm00001d028777_P001 | Maize | nucleus | 21.25 | 18.18 |
Protein Annotations
| EnsemblPlants:Zm00001d013931_P001 | EnsemblPlants:Zm00001d013931_T001 | EnsemblPlantsGene:Zm00001d013931 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF933 | PFAM:PF00249 | PFscan:PS51294 | ProteinID:AQK64824.1 | SEG:seg |
| SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004DEA7A1 | UniProt:A0A1D6GNN1 | MapMan:15.5.2.1 | : |
Description
MYB-transcription factor 102Transcription factor MYB36
Coordinates
chr5:+:25111416..25112574
Molecular Weight (calculated)
29164.9 Da
IEP (calculated)
9.369
GRAVY (calculated)
-0.315
Length
273 amino acids
Sequence
(BLAST)
(BLAST)
001: MMKKGKWSKA EDELIINHIQ RHGGIGRSWQ ALSDSLGLGR CGRSCRSRWL NYLRPGLKHG HFTPAEDRII CEMYRRKGSC WSVIAAQLPG RTDLAVKNYW
101: NSTLKKKYRP LPAARTAAAA TWRRHRACAA DSTSSDAGVP ARGLQPAVCS SGGSSSSEES STAGSSSPVK PVLAGPTTPV PLAAASQEPV ASVPASGPAV
201: LFEQKPALVG RLPLEKTPPL PPPPAGGQTG GGLMDIVCRP LSPIPLSFME SELLACIDGF DDTDSFLPWF DQH
101: NSTLKKKYRP LPAARTAAAA TWRRHRACAA DSTSSDAGVP ARGLQPAVCS SGGSSSSEES STAGSSSPVK PVLAGPTTPV PLAAASQEPV ASVPASGPAV
201: LFEQKPALVG RLPLEKTPPL PPPPAGGQTG GGLMDIVCRP LSPIPLSFME SELLACIDGF DDTDSFLPWF DQH
001: MGRAPCCDKM AVKKGPWSTE EDAVLKSYIE KHGTGNNWIS LPQRIGIKRC GKSCRLRWLN YLRPNLKHGG FTDEEDYIIC SLYITIGSRW SIIASQLPGR
101: TDNDIKNYWN TRLKKKLLSK QGKAFHQQLN VKFERGTTSS SSSQNQIQIF HDENTKSNQT LYNQVVDPSM RAFAMEEQSM IKNQILEPFS WEPNKVLFDV
201: DYDAAASSYH HHASPSLNSM SSTSSIGTNN SSLQMSHYTV NHNDHDQPDM FFMDGFENFQ AELFDEIANN NTVENGFDGT EILINNNYLD HDISSFIDYP
301: LYDNE
101: TDNDIKNYWN TRLKKKLLSK QGKAFHQQLN VKFERGTTSS SSSQNQIQIF HDENTKSNQT LYNQVVDPSM RAFAMEEQSM IKNQILEPFS WEPNKVLFDV
201: DYDAAASSYH HHASPSLNSM SSTSSIGTNN SSLQMSHYTV NHNDHDQPDM FFMDGFENFQ AELFDEIANN NTVENGFDGT EILINNNYLD HDISSFIDYP
301: LYDNE
Arabidopsis Description
MYB87Transcription factor MYB87 [Source:UniProtKB/Swiss-Prot;Acc:F4JSU0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.