Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G169400.1 | Wheat | nucleus | 84.33 | 86.05 |
| KXG38237 | Sorghum | nucleus | 52.0 | 60.94 |
| Zm00001d013931_P001 | Maize | nucleus | 53.0 | 58.24 |
| HORVU1Hr1G051980.2 | Barley | nucleus | 42.33 | 51.42 |
| GSMUA_Achr4P01050_001 | Banana | nucleus | 23.0 | 30.53 |
| HORVU3Hr1G068550.1 | Barley | nucleus | 21.67 | 29.82 |
| HORVU4Hr1G087730.1 | Barley | nucleus | 21.33 | 29.36 |
| GSMUA_Achr1P04910_001 | Banana | nucleus | 22.67 | 27.98 |
| HORVU4Hr1G055640.1 | Barley | cytosol | 4.0 | 27.91 |
| VIT_04s0008g00620.t01 | Wine grape | nucleus | 24.0 | 27.27 |
| HORVU7Hr1G096190.1 | Barley | nucleus | 23.33 | 26.92 |
| GSMUA_Achr7P25060_001 | Banana | nucleus | 26.0 | 26.71 |
| HORVU5Hr1G098540.1 | Barley | nucleus | 27.33 | 26.37 |
| HORVU1Hr1G061220.1 | Barley | nucleus | 26.0 | 24.61 |
| HORVU5Hr1G063410.1 | Barley | nucleus | 24.33 | 24.25 |
| KRH15488 | Soybean | nucleus | 24.0 | 23.84 |
| KRH05529 | Soybean | nucleus | 24.33 | 23.62 |
| HORVU3Hr1G019590.2 | Barley | nucleus | 21.0 | 23.42 |
| HORVU2Hr1G081720.2 | Barley | nucleus | 23.33 | 22.44 |
| HORVU2Hr1G010450.2 | Barley | nucleus | 25.0 | 21.37 |
| HORVU6Hr1G083250.1 | Barley | nucleus | 25.0 | 20.66 |
| HORVU4Hr1G055680.1 | Barley | nucleus | 20.67 | 20.53 |
| HORVU3Hr1G063460.4 | Barley | nucleus | 17.0 | 16.4 |
| HORVU1Hr1G084170.4 | Barley | nucleus | 8.67 | 8.07 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G045090.1 | EnsemblPlantsGene:HORVU1Hr1G045090 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF933 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 | SUPFAM:SSF46689 |
| UniParc:UPI000B474543 | UniProt:A0A287FDB9 | MapMan:15.5.2.1 | : | : | : |
Description
No Description!
Coordinates
chrchr1H:+:327493945..327498471
Molecular Weight (calculated)
32577.7 Da
IEP (calculated)
8.483
GRAVY (calculated)
-0.536
Length
300 amino acids
Sequence
(BLAST)
(BLAST)
001: PGDKKKPCPM KGGMKKGKWS KEEDNLIKNH IEKYGIGCSW QGLSNTLGLR RCGRSCRSRW LNYLRPGLKH GSFTPAEDRI ICEMYRQKGS CWSVIAAELP
101: GRTDLAIKNY WNSTLKKRFP RAAKSRRRRR RRRTGSTSST SSDATSLDLG LEESISGTAR NLPLVVCNEG DSATATTARH LPLVVYNEAS ATAESSSSDA
201: GAVSAGSPVQ ARAQPPPLPA AAANEEPIAA VPVSGPVKME PRTPPPPADE TSEEMDVGCC PMSPLPLGFM DEPDLPCITM GLPHVACFDD IDSFLSYFDH
101: GRTDLAIKNY WNSTLKKRFP RAAKSRRRRR RRRTGSTSST SSDATSLDLG LEESISGTAR NLPLVVCNEG DSATATTARH LPLVVYNEAS ATAESSSSDA
201: GAVSAGSPVQ ARAQPPPLPA AAANEEPIAA VPVSGPVKME PRTPPPPADE TSEEMDVGCC PMSPLPLGFM DEPDLPCITM GLPHVACFDD IDSFLSYFDH
001: MGRAPCCDKA NVKKGPWSPE EDVKLKDYID KYGTGGNWIA LPQKIGLKRC GKSCRLRWLN YLRPNIKHGG FSEEEDRIIL SLYISIGSRW SIIAAQLPGR
101: TDNDIKNYWN TKLKKKLLGR QKQMNRQDSI TDSTENNLSN NNNNKSPQNL SNSALERLQL HMQLQNLQSP FSSFYNNPIL WPKLHPLLQS TTTNQNPKLA
201: SQESFHPLGV NVDHQHNNTK LAQINNGASS LYSENVEQSQ NPAHEFQPNF GFSQDLRLDN HNMDFMNRGV SKELFQVGNE FELTNGSSWW SEEVELERKT
301: TSSSSWGSAS VLDQTTEGMV MLQDYAQMSY HSV
101: TDNDIKNYWN TKLKKKLLGR QKQMNRQDSI TDSTENNLSN NNNNKSPQNL SNSALERLQL HMQLQNLQSP FSSFYNNPIL WPKLHPLLQS TTTNQNPKLA
201: SQESFHPLGV NVDHQHNNTK LAQINNGASS LYSENVEQSQ NPAHEFQPNF GFSQDLRLDN HNMDFMNRGV SKELFQVGNE FELTNGSSWW SEEVELERKT
301: TSSSSWGSAS VLDQTTEGMV MLQDYAQMSY HSV
Arabidopsis Description
MYB36Transcription factor MYB36 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKL2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.