Factsheet for HORVU2Hr1G010450.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G068000.1	Wheat	nucleus	94.87	95.42
TraesCS2B01G082400.1	Wheat	nucleus	95.16	95.16
TraesCS2A01G069300.1	Wheat	nucleus	94.3	95.11
EES10507	Sorghum	nucleus	60.97	60.62
Zm00001d004126_P001	Maize	nucleus	58.69	57.22
HORVU4Hr1G055640.1	Barley	cytosol	5.7	46.51
HORVU7Hr1G096190.1	Barley	nucleus	30.48	41.15
HORVU3Hr1G068550.1	Barley	nucleus	24.5	39.45
HORVU4Hr1G087730.1	Barley	nucleus	23.93	38.53
Solyc06g074910.2.1	Tomato	nucleus	31.91	37.09
KRH26521	Soybean	nucleus	34.76	35.88
KRH22841	Soybean	nucleus	34.47	35.59
HORVU5Hr1G098540.1	Barley	nucleus	31.34	35.37
KRH25089	Soybean	nucleus	31.34	34.92
HORVU5Hr1G063410.1	Barley	nucleus	29.91	34.88
KRH41459	Soybean	nucleus	19.37	34.34
HORVU1Hr1G061220.1	Barley	nucleus	30.77	34.07
Solyc06g074920.1.1	Tomato	nucleus	28.49	33.9
KRH30589	Soybean	nucleus	31.62	33.74
HORVU6Hr1G083250.1	Barley	nucleus	34.47	33.33
HORVU3Hr1G019590.2	Barley	nucleus	24.5	31.97
PGSC0003DMT400020979	Potato	nucleus	16.52	29.15
HORVU4Hr1G055680.1	Barley	nucleus	24.5	28.48
HORVU1Hr1G051980.2	Barley	nucleus	19.37	27.53
HORVU2Hr1G081720.2	Barley	nucleus	23.36	26.28
HORVU1Hr1G045090.1	Barley	nucleus	21.37	25.0
HORVU3Hr1G063460.4	Barley	nucleus	21.37	24.12
HORVU1Hr1G084170.4	Barley	nucleus	14.24	15.53

Protein Annotations

EMBL:AK368660	EnsemblPlants:HORVU2Hr1G010450.2	EnsemblPlantsGene:HORVU2Hr1G010450	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:SANT/Myb
PANTHER:PTHR10641	PANTHER:PTHR10641:SF687	PFAM:PF00249	PFscan:PS51294	SEG:seg	SMART:SM00717
SUPFAM:SSF46689	UniParc:UPI00020079ED	UniProt:F2DXP2	MapMan:15.5.2.1	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DXP2]

Coordinates

chrchr2H:+:19898640..19902168

Molecular Weight (calculated)

38256.0 Da

IEP (calculated)

8.232

GRAVY (calculated)

-0.713

Length

351 amino acids

Sequence
(BLAST)

001: MGRAPCCDKN NVKKGPWSPE EDAKLKEFMD KHGTGGNWIA LPQKAGLRRC GKSCRLRWLN YLRPNIKHGE FTEHEDRVIC SMYASIGSRW SIIASQLPGR
101: TDNDIKNYWN TKLKKKLLGS TTMAGAGPPP RAPRQNHPHQ HRPVLLPYSS SPHSNYSNFF PGAGALLQQS AEALTLQPQD HYMLGSSGSL NPMASNNGAS
201: AVQLQMLHAT TAHRQLQVKE ECGSGGAMIA FGCGDQQSCS SSDGTQYAGG QYVHGGRHHG KEMSFDNNNN GYGAYGVYGN GAGAVEQEHK LSFQLQHQHE
301: EQQQQQAQLD YSYEEIKQLL MTAAASGPDG GGGLIHDPEL IGAHAGKLTM M

Best Arabidopsis Sequence Match ( AT5G65790.1 )
(BLAST)

001: MGRAPCCDKA NVKKGPWSPE EDAKLKDYIE NSGTGGNWIA LPQKIGLRRC GKSCRLRWLN YLRPNIKHGG FSEEEDNIIC NLYVTIGSRW SIIAAQLPGR
101: TDNDIKNYWN TRLKKKLLNK QRKEFQEARM KQEMVMMKRQ QQGQGQGQSN GSTDLYLNNM FGSSPWPLLP QLPPPHHQIP LGMMEPTSCN YYQTTPSCNL
201: EQKPLITLKN MVKIEEEQER TNPDHHHQDS VTNPFDFSFS QLLLDPNYYL GSGGGGEGDF AIMSSSTNSP LPNTSSDQHP SQQQEILQWF GSSNFQTEAI
301: NDMFINNNNN IVNLETIENT KVYGDASVAG AAVRAALGGG TTSTSADQST ISWEDITSLV NSEDASYFNA PNHV

Arabidopsis Description

ATMYB68At5g65790 [Source:UniProtKB/TrEMBL;Acc:O49538]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.