CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH30589	Soybean	nucleus	93.97	89.97
KRH60169	Soybean	nucleus	33.97	43.15
KRH19894	Soybean	nucleus	40.0	41.31
KRH74186	Soybean	nucleus	33.02	39.85
KRH32503	Soybean	nucleus	40.32	39.69
KRH49024	Soybean	nucleus	32.7	39.62
KRH26521	Soybean	nucleus	41.9	38.82
KRH22841	Soybean	nucleus	41.27	38.24
KRH41459	Soybean	nucleus	23.81	37.88
KRH58168	Soybean	nucleus	39.68	37.31
KRG96025	Soybean	nucleus	39.05	37.27
KRH67733	Soybean	nucleus	38.1	37.27
KRH04372	Soybean	nucleus	39.68	36.87
KRH15488	Soybean	nucleus	33.97	35.43
KRH77168	Soybean	nucleus	38.73	35.16
KRH28317	Soybean	nucleus	38.73	35.06
KRH05529	Soybean	nucleus	33.97	34.63
KRH52158	Soybean	nucleus	37.46	33.24
KRH18986	Soybean	nucleus	38.1	33.15
KRH61462	Soybean	nucleus	36.83	33.14
Zm00001d004126_P001	Maize	nucleus	37.78	33.06
KRH15479	Soybean	nucleus	37.78	32.69
KRG88657	Soybean	nucleus	38.1	32.52
KRH02902	Soybean	nucleus	37.46	32.33
TraesCS2A01G069300.1	Wheat	nucleus	35.24	31.9
TraesCS2D01G068000.1	Wheat	nucleus	34.92	31.52
TraesCS2B01G082400.1	Wheat	nucleus	34.92	31.34
HORVU2Hr1G010450.2	Barley	nucleus	34.92	31.34
KRH63439	Soybean	nucleus	24.44	28.95
KRH46482	Soybean	nucleus	28.57	27.69
KRG98401	Soybean	nucleus	28.25	27.3
KRG93460	Soybean	nucleus	29.84	27.25
KRH18536	Soybean	endoplasmic reticulum	29.84	25.07
KRH54481	Soybean	nucleus	24.44	23.33

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	EMBL:ACUP02007202	EnsemblPlantsGene:GLYMA_12G079800	GO:GO:0000981	GO:GO:0001135
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006357	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0030154	GO:GO:0043565	GO:GO:0044212
InterPro:Homeobox-like_sf	UniProt:I1LR75	InterPro:IPR017930	EnsemblPlants:KRH25089	ProteinID:KRH25089	ProteinID:KRH25089.1
InterPro:Myb_dom	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF506	InterPro:SANT/Myb
SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI000233D894	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr12:-:6254464..6256886

Molecular Weight (calculated)

35842.5 Da

IEP (calculated)

6.698

GRAVY (calculated)

-0.815

Length

315 amino acids

Sequence
(BLAST)

001: MGRAPCCDKA SVKRGPWSPE EDTKLKEYIE KHGTGGNWIA LPQKAGLKRC GKSCRLRWLN YLRPNIKHGD FSDEEDRIIC SLYVNIGSRW SIIAAQLPGR
101: TDNDIKNYWN TKLKKKLMGL LPLSHHRKQP SFPSSTLQNS PPSPSSDQLY GEYCTYTPLT TTSFTSNIEP FSLPSSNYAS TSTTSVSHSF YQNQDSMQQC
201: YHPTRDNNML MFGSEGSCST SSDGSCTQGR EIIKQEEIGY HSYNNDYNFM LNHSNNINDG EKSCFGEWFS QTLLTPLDYD LEDIKQLISS SSSTASFNNV
301: DENKTEEKAM YYYYY

Best Arabidopsis Sequence Match ( AT2G36890.2 )
(BLAST)

001: MSLSLIITEP ENSFSFPFFS FKKQNKDIST KTLRPRETDR EMGRAPCCDK ANVKRGPWSP EEDAKLKDYI EKQGTGGNWI ALPHKAGLRR CGKSCRLRWL
101: NYLRPNIRHG DFTEEEDNII YSLFASIGSR WSVIAAHLQG RTDNDIKNYW NTKLKKKLIA TMAPPPHHHL AIATSSSSAS PSSSSHYNMI NSLLPYNPST
201: NQLLTPHQGI MMTMMGQQQQ LFYQEDMGNL VNSPNRNNLI MSHQEDNQEQ STNKGIMLLS DVRSGSSTTS TVTRVKMEHR DHDDHHHHHE EDERSMTSVV
301: MEDYGMEEIK QLISSSCTSS NNSLWFDENK TEDKFMLYY

Arabidopsis Description

RAX2Duplicated homeodomain-like superfamily protein [Source:TAIR;Acc:AT2G36890]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.