Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH49024 | Soybean | nucleus | 90.04 | 90.38 |
| KRH60169 | Soybean | nucleus | 57.47 | 60.48 |
| KRH41459 | Soybean | nucleus | 44.83 | 59.09 |
| Solyc08g065910.1.1 | Tomato | nucleus | 35.63 | 43.66 |
| Solyc12g008670.1.1 | Tomato | nucleus | 46.36 | 42.91 |
| PGSC0003DMT400000932 | Potato | nucleus | 46.36 | 41.87 |
| KRH15488 | Soybean | nucleus | 42.91 | 37.09 |
| VIT_11s0016g02780.t01 | Wine grape | nucleus | 39.85 | 36.49 |
| KRH05529 | Soybean | nucleus | 42.91 | 36.25 |
| KRH19894 | Soybean | nucleus | 39.85 | 34.1 |
| PGSC0003DMT400035941 | Potato | nucleus | 23.75 | 33.88 |
| KRH58168 | Soybean | nucleus | 42.53 | 33.13 |
| KRH25089 | Soybean | nucleus | 39.85 | 33.02 |
| KRH32503 | Soybean | nucleus | 39.85 | 32.5 |
| KRH04372 | Soybean | nucleus | 42.15 | 32.45 |
| KRH67733 | Soybean | nucleus | 39.46 | 31.99 |
| KRH77168 | Soybean | nucleus | 42.15 | 31.7 |
| KRG96025 | Soybean | nucleus | 39.85 | 31.52 |
| KRH61462 | Soybean | nucleus | 42.15 | 31.43 |
| KRH30589 | Soybean | nucleus | 39.46 | 31.31 |
| KRH28317 | Soybean | nucleus | 41.38 | 31.03 |
| KRH26521 | Soybean | nucleus | 39.85 | 30.59 |
| KRH18986 | Soybean | nucleus | 42.15 | 30.39 |
| KRH22841 | Soybean | nucleus | 39.46 | 30.29 |
| KRH02902 | Soybean | nucleus | 42.15 | 30.14 |
| KRH52158 | Soybean | nucleus | 40.61 | 29.86 |
| KRH15479 | Soybean | nucleus | 41.0 | 29.4 |
| KRG88657 | Soybean | nucleus | 41.0 | 29.0 |
| KRG93460 | Soybean | nucleus | 36.4 | 27.54 |
| KRH63439 | Soybean | nucleus | 27.97 | 27.44 |
| KRH46482 | Soybean | nucleus | 32.18 | 25.85 |
| KRG98401 | Soybean | nucleus | 32.18 | 25.77 |
| KRH18536 | Soybean | endoplasmic reticulum | 36.4 | 25.33 |
| KRH54481 | Soybean | nucleus | 27.2 | 21.52 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | EntrezGene:778160 | EMBL:ACUP02000007 | EMBL:DQ902863 | EnsemblPlantsGene:GLYMA_01G004900 |
| GO:GO:0000981 | GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006357 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0030154 |
| GO:GO:0043565 | GO:GO:0044212 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | EnsemblPlants:KRH74186 | ProteinID:KRH74186 |
| ProteinID:KRH74186.1 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF694 |
| UniProt:Q09GS3 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0000E13F0B | SEG:seg |
Description
hypothetical protein
Coordinates
chr1:-:457480..459034
Molecular Weight (calculated)
29085.9 Da
IEP (calculated)
6.391
GRAVY (calculated)
-0.617
Length
261 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRAPCCDKS NVKRGPWSPD EDATLKNYLE KHGTGGNWIA LPKKAGLKRC GKSCRLRWLN YLRPHIKLGG FTEEEDKIIC TLYDTIGSRW SFIAAQLPGR
101: TDNDVKNHWN TKLKKKFLAG NTSSTAATTS NNNVTFSNTS YSDQVKTLVL DHQKLNSADN WFDYSYNVLE LEQTPIPVPF PMSQELEAFN YTAGSISCSA
201: PPPSKEVSML SNADNHTLWF GYDHASEDDP NLLEFVLDDD LLNHGFVSQD KSCSQVGPPS G
101: TDNDVKNHWN TKLKKKFLAG NTSSTAATTS NNNVTFSNTS YSDQVKTLVL DHQKLNSADN WFDYSYNVLE LEQTPIPVPF PMSQELEAFN YTAGSISCSA
201: PPPSKEVSML SNADNHTLWF GYDHASEDDP NLLEFVLDDD LLNHGFVSQD KSCSQVGPPS G
001: MGRAPCCDKA NVKRGPWSPE EDAKLKDYIE KQGTGGNWIA LPHKAGLRRC GKSCRLRWLN YLRPNIRHGD FTEEEDNIIY SLFASIGSRW SVIAAHLQGR
101: TDNDIKNYWN TKLKKKLIAT MAPPPHHHLA IATSSSSASP SSSSHYNMIN SLLPYNPSTN QLLTPHQGIM MTMMGQQQQL FYQEDMGNLV NSPNRNNLIM
201: SHQEDNQEQS TNKGIMLLSD VRSGSSTTST VTRVKMEHRD HDDHHHHHEE DERSMTSVVM EDYGMEEIKQ LISSSCTSSN NSLWFDENKT EDKFMLYY
101: TDNDIKNYWN TKLKKKLIAT MAPPPHHHLA IATSSSSASP SSSSHYNMIN SLLPYNPSTN QLLTPHQGIM MTMMGQQQQL FYQEDMGNLV NSPNRNNLIM
201: SHQEDNQEQS TNKGIMLLSD VRSGSSTTST VTRVKMEHRD HDDHHHHHEE DERSMTSVVM EDYGMEEIKQ LISSSCTSSN NSLWFDENKT EDKFMLYY
Arabidopsis Description
RAX2Duplicated homeodomain-like superfamily protein [Source:TAIR;Acc:AT2G36890]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.