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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 6
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc08g065910.1.1 Tomato nucleus 33.33 44.6
VIT_04s0008g00620.t01 Wine grape nucleus 40.35 43.56
KRH49024 Soybean nucleus 37.54 41.15
KRH74186 Soybean nucleus 36.49 39.85
PGSC0003DMT400035941 Potato nucleus 24.56 38.25
PGSC0003DMT400000932 Potato nucleus 38.25 37.72
Solyc12g008670.1.1 Tomato nucleus 37.19 37.59
KRH60169 Soybean nucleus 32.28 37.1
VIT_00s1352g00010.t01 Wine grape nucleus 41.05 34.51
VIT_06s0061g00470.t01 Wine grape nucleus 36.14 32.49
VIT_18s0001g08470.t01 Wine grape nucleus 38.25 32.06
VIT_17s0000g05400.t01 Wine grape nucleus 32.28 30.07
VIT_11s0052g01490.t01 Wine grape nucleus 36.84 28.77
VIT_08s0007g05030.t01 Wine grape nucleus 32.63 27.19
VIT_19s0015g01280.t01 Wine grape nucleus 29.47 25.45
VIT_14s0066g02180.t01 Wine grape nucleus 33.33 21.79
Protein Annotations
Gene3D:1.10.10.60EntrezGene:100243880wikigene:100243880MapMan:15.5.2.1EMBL:AM481708ProteinID:CAN81807
ProteinID:CAN81807.1ProteinID:CBI27967ProteinID:CBI27967.3UniProt:D7TBD2EMBL:FN595756GO:GO:0000981
GO:GO:0001135GO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0003700GO:GO:0005488
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139GO:GO:0006357
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0030154GO:GO:0043565
GO:GO:0044212InterPro:Homeobox-like_sfInterPro:IPR017930EntrezGene:LOC100243880wikigene:LOC100243880InterPro:Myb_dom
PFAM:PF00249PFscan:PS51294PANTHER:PTHR10641PANTHER:PTHR10641:SF694InterPro:SANT/MybSMART:SM00717
SUPFAM:SSF46689UniParc:UPI0001BE2FC2ArrayExpress:VIT_11s0016g02780EnsemblPlantsGene:VIT_11s0016g02780EnsemblPlants:VIT_11s0016g02780.t01RefSeq:XP_002280054
RefSeq:XP_002280054.2SEG:seg::::
Description
No Description!
Coordinates
chr11:-:2193249..2194453
Molecular Weight (calculated)
31158.1 Da
IEP (calculated)
7.178
GRAVY (calculated)
-0.546
Length
285 amino acids
Sequence
(BLAST)
001: MGRAPCCDKA NVKRGPWSPE EDNILRAFVE AHGTGGNWIA LPRKAGLKRC GKSCRLRWLN YLRPDIKHGG FTEDEDNIIV TLYNNIGSRW SVIASHLPRR
101: TDNDVKNYWN TKLKKKLSGK ADLKKGSNNN GNATSNSIIH LSSVQFPGSI PKVEDYDYGI SVGFGTDSSP VSYQTGMSYQ QDFHSQGLVS NPAVQFPLPG
201: PMEVSEFNTS GNTSYSISSS QEVSSLSAAS SSLALDNTTH ASWSSYNGGR VQDDEFLFDF GSPYGLLSGF GFQEQAHEAG LVNQI
Best Arabidopsis Sequence Match ( AT2G36890.2 )
(BLAST)
001: MSLSLIITEP ENSFSFPFFS FKKQNKDIST KTLRPRETDR EMGRAPCCDK ANVKRGPWSP EEDAKLKDYI EKQGTGGNWI ALPHKAGLRR CGKSCRLRWL
101: NYLRPNIRHG DFTEEEDNII YSLFASIGSR WSVIAAHLQG RTDNDIKNYW NTKLKKKLIA TMAPPPHHHL AIATSSSSAS PSSSSHYNMI NSLLPYNPST
201: NQLLTPHQGI MMTMMGQQQQ LFYQEDMGNL VNSPNRNNLI MSHQEDNQEQ STNKGIMLLS DVRSGSSTTS TVTRVKMEHR DHDDHHHHHE EDERSMTSVV
301: MEDYGMEEIK QLISSSCTSS NNSLWFDENK TEDKFMLYY
Arabidopsis Description
RAX2Duplicated homeodomain-like superfamily protein [Source:TAIR;Acc:AT2G36890]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.