CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG88657	Soybean	nucleus	90.11	88.89
KRH52158	Soybean	nucleus	64.56	66.2
KRH61462	Soybean	nucleus	62.91	65.43
VIT_18s0001g08470.t01	Wine grape	nucleus	44.78	47.94
KRH19894	Soybean	nucleus	34.89	41.64
KRH77168	Soybean	nucleus	39.56	41.5
KRH28317	Soybean	nucleus	39.56	41.38
KRH04372	Soybean	nucleus	38.46	41.3
KRH74186	Soybean	nucleus	29.4	41.0
KRH58168	Soybean	nucleus	37.64	40.9
KRH49024	Soybean	nucleus	29.12	40.77
KRH60169	Soybean	nucleus	27.2	39.92
KRH32503	Soybean	nucleus	34.89	39.69
KRH67733	Soybean	nucleus	33.52	37.89
KRH25089	Soybean	nucleus	32.69	37.78
KRG96025	Soybean	nucleus	33.79	37.27
KRH26521	Soybean	nucleus	34.07	36.47
KRH15488	Soybean	nucleus	30.22	36.42
KRH18986	Soybean	nucleus	35.99	36.19
KRH05529	Soybean	nucleus	30.22	35.6
KRH22841	Soybean	nucleus	33.24	35.59
KRH30589	Soybean	nucleus	32.14	35.56
KRH02902	Soybean	nucleus	35.44	35.34
KRH41459	Soybean	nucleus	18.96	34.85
KRH63439	Soybean	nucleus	21.7	29.7
KRH46482	Soybean	nucleus	24.73	27.69
KRG98401	Soybean	nucleus	24.45	27.3
KRG93460	Soybean	nucleus	24.73	26.09
KRH18536	Soybean	endoplasmic reticulum	25.0	24.27
KRH54481	Soybean	nucleus	21.7	23.94

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100815092	MapMan:15.5.2.1	EMBL:ACUP02008604	EnsemblPlantsGene:GLYMA_14G090900	GO:GO:0000981
GO:GO:0001135	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006357
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0030154	GO:GO:0043565
GO:GO:0044212	InterPro:Homeobox-like_sf	UniProt:I1M8X8	InterPro:IPR017930	EnsemblPlants:KRH15479	ProteinID:KRH15479
ProteinID:KRH15479.1	InterPro:Myb_dom	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF654
InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI00023D33E3	SEG:seg	:

Description

hypothetical protein

Coordinates

chr14:-:8299589..8301715

Molecular Weight (calculated)

40728.6 Da

IEP (calculated)

7.339

GRAVY (calculated)

-0.767

Length

364 amino acids

Sequence
(BLAST)

001: MGRAPCCDKA NVKKGPWSPE EDAKLKSYIE KHGTGGNWIA LPQKIGLKRC GKSCRLRWLN YLRPNLKHGG FSVEEDDIIC SLYVSIGSRW SVIAAQLPGR
101: TDNDIKNYWN TRLKKKLLGK HRREPRNRGN YNSVKQENDV NRGSGTTDGD SSSLSLLQEN GSTTHHQEQH QQQPCWPQNI NNMPVLPLQV PLPYKNQGPC
201: FNDQDSLKKL LIKLGGRFSG DSYHPTLDGL NLEFSSHGQQ IYQEQVHVGS SAACISATIN NNNEVQFAQT GQYPGVDNLV QGQGGNFTPS FEEMVSSSNY
301: PDGLEFLYNE GMIDHKIIDT TTTTTWGETS TPIYHHHDSL ASTYQGQGVI QECVLQDFSY PRAQ

Best Arabidopsis Sequence Match ( AT5G65790.1 )
(BLAST)

001: MGRAPCCDKA NVKKGPWSPE EDAKLKDYIE NSGTGGNWIA LPQKIGLRRC GKSCRLRWLN YLRPNIKHGG FSEEEDNIIC NLYVTIGSRW SIIAAQLPGR
101: TDNDIKNYWN TRLKKKLLNK QRKEFQEARM KQEMVMMKRQ QQGQGQGQSN GSTDLYLNNM FGSSPWPLLP QLPPPHHQIP LGMMEPTSCN YYQTTPSCNL
201: EQKPLITLKN MVKIEEEQER TNPDHHHQDS VTNPFDFSFS QLLLDPNYYL GSGGGGEGDF AIMSSSTNSP LPNTSSDQHP SQQQEILQWF GSSNFQTEAI
301: NDMFINNNNN IVNLETIENT KVYGDASVAG AAVRAALGGG TTSTSADQST ISWEDITSLV NSEDASYFNA PNHV

Arabidopsis Description

ATMYB68At5g65790 [Source:UniProtKB/TrEMBL;Acc:O49538]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.