Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH18536 | Soybean | endoplasmic reticulum | 92.75 | 85.33 |
| Solyc03g059200.1.1 | Tomato | nucleus | 44.06 | 57.79 |
| PGSC0003DMT400022009 | Potato | nucleus | 44.93 | 52.9 |
| AT3G28470.1 | Thale cress | nucleus | 47.83 | 52.05 |
| Bra025337.1-P | Field mustard | nucleus | 48.41 | 51.7 |
| CDX86430 | Canola | nucleus | 48.41 | 51.7 |
| VIT_14s0066g02180.t01 | Wine grape | nucleus | 57.39 | 45.41 |
| GSMUA_Achr3P10060_001 | Banana | nucleus | 42.03 | 45.31 |
| Os03t0296000-00 | Rice | nucleus | 13.04 | 43.69 |
| KRH63439 | Soybean | nucleus | 29.86 | 38.72 |
| TraesCS4D01G192400.1 | Wheat | nucleus | 34.2 | 38.31 |
| TraesCS4A01G113000.1 | Wheat | nucleus | 33.91 | 38.11 |
| TraesCS4B01G191200.1 | Wheat | nucleus | 33.91 | 37.99 |
| Zm00001d028777_P001 | Maize | nucleus | 35.07 | 37.93 |
| HORVU4Hr1G055680.1 | Barley | nucleus | 33.04 | 37.75 |
| OQU92760 | Sorghum | nucleus | 35.36 | 37.2 |
| KRH74186 | Soybean | nucleus | 27.54 | 36.4 |
| KRH49024 | Soybean | nucleus | 26.67 | 35.38 |
| KRG98401 | Soybean | nucleus | 33.33 | 35.28 |
| KRH46482 | Soybean | nucleus | 33.04 | 35.08 |
| KRH60169 | Soybean | nucleus | 24.93 | 34.68 |
| KRH05529 | Soybean | nucleus | 31.01 | 34.63 |
| KRH41459 | Soybean | nucleus | 19.71 | 34.34 |
| KRH15488 | Soybean | nucleus | 29.86 | 34.11 |
| KRH54481 | Soybean | nucleus | 29.28 | 30.61 |
| KRH19894 | Soybean | nucleus | 26.67 | 30.16 |
| KRH25089 | Soybean | nucleus | 27.25 | 29.84 |
| KRH32503 | Soybean | nucleus | 26.67 | 28.75 |
| KRH58168 | Soybean | nucleus | 27.83 | 28.66 |
| KRH30589 | Soybean | nucleus | 27.25 | 28.57 |
| KRH04372 | Soybean | nucleus | 27.83 | 28.32 |
| KRH26521 | Soybean | nucleus | 27.54 | 27.94 |
| KRH22841 | Soybean | nucleus | 27.54 | 27.94 |
| KRH18986 | Soybean | nucleus | 28.41 | 27.07 |
| KRH77168 | Soybean | nucleus | 26.96 | 26.8 |
| KRG96025 | Soybean | nucleus | 25.51 | 26.67 |
| KRH67733 | Soybean | nucleus | 24.64 | 26.4 |
| KRH28317 | Soybean | nucleus | 26.38 | 26.15 |
| KRH02902 | Soybean | nucleus | 27.25 | 25.75 |
| CDX85201 | Canola | endoplasmic reticulum, vacuole | 47.25 | 24.92 |
| KRH15479 | Soybean | nucleus | 26.09 | 24.73 |
| KRH61462 | Soybean | nucleus | 24.35 | 24.0 |
| KRG88657 | Soybean | nucleus | 25.51 | 23.85 |
| KRH52158 | Soybean | nucleus | 24.06 | 23.38 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | EMBL:ACUP02011561 | EnsemblPlantsGene:GLYMA_19G017900 | GO:GO:0000003 | GO:GO:0000981 |
| GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006357 |
| GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009791 | GO:GO:0009908 |
| GO:GO:0009987 | GO:GO:0030154 | GO:GO:0043565 | GO:GO:0044212 | GO:GO:0048443 | InterPro:Homeobox-like_sf |
| UniProt:I1N608 | InterPro:IPR017930 | EnsemblPlants:KRG93460 | ProteinID:KRG93460 | ProteinID:KRG93460.1 | InterPro:Myb_dom |
| PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF716 | InterPro:SANT/Myb | SMART:SM00717 |
| SUPFAM:SSF46689 | UniParc:UPI000233F489 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr19:-:1848300..1850050
Molecular Weight (calculated)
37749.2 Da
IEP (calculated)
6.415
GRAVY (calculated)
-0.531
Length
345 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRPPCCDKS NVKRGLWTPE EDAKILAYVV NHGTGNWTLV PKKAGLNRCG KSCRLRWTNY LRPDLKHDGF TPQEEELIIN LHGAIGSRWS IIAKRLPGRT
101: DNDVKNYWNT KLRKKLMKMG IDPVTHKPVS QVLSDLGSIS GLPNTTTNQI AFINKDLMMS NMLPITKTEP SGSNKSTVEH TQEGQVPSWE HHIPYQVIIN
201: SENIQSHVLS EAASSTSSSS SSNITQLGSP QSYSCQTPQA QIAPPCSSFD WSEFLQSDSF NWSLNPSSGI IQSEAELSNN AKSNGNDMQG GASEGSGSGA
301: VACGASMEYQ INKQCEAHSF VDGILDRDSE IRAAFPELLD ASFDC
101: DNDVKNYWNT KLRKKLMKMG IDPVTHKPVS QVLSDLGSIS GLPNTTTNQI AFINKDLMMS NMLPITKTEP SGSNKSTVEH TQEGQVPSWE HHIPYQVIIN
201: SENIQSHVLS EAASSTSSSS SSNITQLGSP QSYSCQTPQA QIAPPCSSFD WSEFLQSDSF NWSLNPSSGI IQSEAELSNN AKSNGNDMQG GASEGSGSGA
301: VACGASMEYQ INKQCEAHSF VDGILDRDSE IRAAFPELLD ASFDC
001: MGRPPCCDKS NVKKGLWTEE EDAKILAYVA IHGVGNWSLI PKKAGLNRCG KSCRLRWTNY LRPDLKHDSF STQEEELIIE CHRAIGSRWS SIARKLPGRT
101: DNDVKNHWNT KLKKKLMKMG IDPVTHKPVS QLLAEFRNIS GHGNASFKTE PSNNSILTQS NSAWEMMRNT TTNHESYYTN SPMMFTNSSE YQTTPFHFYS
201: HPNHLLNGTT SSCSSSSSST SITQPNQVPQ TPVTNFYWSD FLLSDPVPQV VGSSATSDLT FTQNEHHFNI EAEYISQNID SKASGTCHSA SSFVDEILDK
301: DQEMLSQFPQ LLNDFDY
101: DNDVKNHWNT KLKKKLMKMG IDPVTHKPVS QLLAEFRNIS GHGNASFKTE PSNNSILTQS NSAWEMMRNT TTNHESYYTN SPMMFTNSSE YQTTPFHFYS
201: HPNHLLNGTT SSCSSSSSST SITQPNQVPQ TPVTNFYWSD FLLSDPVPQV VGSSATSDLT FTQNEHHFNI EAEYISQNID SKASGTCHSA SSFVDEILDK
301: DQEMLSQFPQ LLNDFDY
Arabidopsis Description
MYB35Transcription factor MYB35 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSI7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.