Factsheet for AT3G28470.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra025337.1-P	Field mustard	nucleus	85.8	84.21
CDX86430	Canola	nucleus	85.8	84.21
Solyc03g059200.1.1	Tomato	nucleus	46.69	56.27
PGSC0003DMT400022009	Potato	nucleus	46.06	49.83
KRG93460	Soybean	nucleus	52.05	47.83
KRH18536	Soybean	endoplasmic reticulum	52.68	44.53
Os03t0296000-00	Rice	nucleus	13.56	41.75
GSMUA_Achr3P10060_001	Banana	nucleus	40.69	40.31
VIT_14s0066g02180.t01	Wine grape	nucleus	53.63	38.99
CDX85201	Canola	endoplasmic reticulum, vacuole	80.44	38.99
HORVU4Hr1G055680.1	Barley	nucleus	35.65	37.42
TraesCS4D01G192400.1	Wheat	nucleus	36.28	37.34
TraesCS4B01G191200.1	Wheat	nucleus	36.28	37.34
TraesCS4A01G113000.1	Wheat	nucleus	35.96	37.13
Zm00001d028777_P001	Maize	nucleus	35.65	35.42
OQU92760	Sorghum	nucleus	35.96	34.76
AT5G56110.1	Thale cress	nucleus	34.07	33.75
AT4G37780.1	Thale cress	nucleus	28.08	29.18
AT3G49690.1	Thale cress	nucleus	26.18	26.77
AT5G23000.1	Thale cress	nucleus	27.44	26.44
AT5G57620.1	Thale cress	nucleus	27.13	25.83
AT2G36890.2	Thale cress	nucleus	26.18	24.48
AT5G65790.1	Thale cress	nucleus	26.81	22.73

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	EntrezGene:822477	ProteinID:AEE77449.1	EMBL:AF062877	ArrayExpress:AT3G28470
EnsemblPlantsGene:AT3G28470	RefSeq:AT3G28470	TAIR:AT3G28470	RefSeq:AT3G28470-TAIR-G	EnsemblPlants:AT3G28470.1	TAIR:AT3G28470.1
Symbol:ATMYB35	EMBL:AY519591	Unigene:At.10904	ProteinID:BAB02863.1	EMBL:DQ446711	EMBL:DQ653114
GO:GO:0000003	GO:GO:0000981	GO:GO:0001135	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0006357	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009791	GO:GO:0009908	GO:GO:0009987	GO:GO:0030154
GO:GO:0043565	GO:GO:0044212	GO:GO:0048658	GO:GO:0052545	GO:GO:0055046	InterPro:Homeobox-like_sf
InterPro:IPR017930	InterPro:Myb_dom	RefSeq:NP_189488.1	PFAM:PF00249	PO:PO:0001078	PO:PO:0007611
PO:PO:0009010	PO:PO:0009031	PO:PO:0009046	PO:PO:0009049	PO:PO:0009071	PO:PO:0020047
PO:PO:0025022	PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF716	UniProt:Q9LSI7	InterPro:SANT/Myb
SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI00000AB8C3	SEG:seg	:	:

Description

MYB35Transcription factor MYB35 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSI7]

Coordinates

chr3:-:10674508..10675724

Molecular Weight (calculated)

35814.7 Da

IEP (calculated)

6.985

GRAVY (calculated)

-0.674

Length

317 amino acids

Sequence
(BLAST)

001: MGRPPCCDKS NVKKGLWTEE EDAKILAYVA IHGVGNWSLI PKKAGLNRCG KSCRLRWTNY LRPDLKHDSF STQEEELIIE CHRAIGSRWS SIARKLPGRT
101: DNDVKNHWNT KLKKKLMKMG IDPVTHKPVS QLLAEFRNIS GHGNASFKTE PSNNSILTQS NSAWEMMRNT TTNHESYYTN SPMMFTNSSE YQTTPFHFYS
201: HPNHLLNGTT SSCSSSSSST SITQPNQVPQ TPVTNFYWSD FLLSDPVPQV VGSSATSDLT FTQNEHHFNI EAEYISQNID SKASGTCHSA SSFVDEILDK
301: DQEMLSQFPQ LLNDFDY

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.