Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY08749 | Canola | nucleus | 12.3 | 90.2 |
| CDY18676 | Canola | nucleus | 74.87 | 89.17 |
| CDY45629 | Canola | nucleus | 87.7 | 89.13 |
| CDY60980 | Canola | nucleus | 74.06 | 88.22 |
| Bra037828.1-P | Field mustard | nucleus | 74.06 | 88.22 |
| CDY08748 | Canola | nucleus | 86.63 | 88.04 |
| Bra024419.1-P | Field mustard | nucleus | 86.63 | 88.04 |
| CDY52538 | Canola | nucleus | 86.63 | 87.8 |
| Bra031847.1-P | Field mustard | nucleus | 86.63 | 87.33 |
| CDY37840 | Canola | nucleus | 86.36 | 87.06 |
| AT3G49690.1 | Thale cress | nucleus | 60.96 | 73.55 |
| GSMUA_Achr5P21840_001 | Banana | nucleus | 28.61 | 51.69 |
| GSMUA_Achr4P28090_001 | Banana | nucleus | 30.75 | 50.88 |
| GSMUA_Achr10P... | Banana | nucleus | 31.28 | 43.66 |
| GSMUA_Achr5P01930_001 | Banana | nucleus | 31.55 | 41.99 |
| GSMUA_Achr7P08150_001 | Banana | nucleus | 28.61 | 41.8 |
| KRH77168 | Soybean | nucleus | 38.24 | 41.21 |
| KRH28317 | Soybean | nucleus | 37.97 | 40.8 |
| GSMUA_Achr4P32240_001 | Banana | nucleus | 29.95 | 40.14 |
| Solyc04g077260.2.1 | Tomato | nucleus | 34.49 | 39.69 |
| PGSC0003DMT400012702 | Potato | nucleus | 34.76 | 39.51 |
| AT4G37780.1 | Thale cress | nucleus | 31.28 | 38.36 |
| GSMUA_Achr6P01850_001 | Banana | nucleus | 32.89 | 36.94 |
| AT5G57620.1 | Thale cress | nucleus | 32.62 | 36.64 |
| GSMUA_Achr6P31740_001 | Banana | nucleus | 32.62 | 36.42 |
| AT2G36890.2 | Thale cress | nucleus | 29.95 | 33.04 |
| AT5G23000.1 | Thale cress | nucleus | 28.07 | 31.91 |
| AT5G56110.1 | Thale cress | nucleus | 23.26 | 27.19 |
| AT3G28470.1 | Thale cress | nucleus | 22.73 | 26.81 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | EntrezGene:836708 | ProteinID:AED98108.1 | EMBL:AK227472 | ArrayExpress:AT5G65790 |
| EnsemblPlantsGene:AT5G65790 | RefSeq:AT5G65790 | TAIR:AT5G65790 | RefSeq:AT5G65790-TAIR-G | EnsemblPlants:AT5G65790.1 | TAIR:AT5G65790.1 |
| Symbol:ATMYB68 | EMBL:AY519647 | ProteinID:BAB10686.1 | EMBL:BT005994 | ProteinID:CAA16681.1 | GO:GO:0000981 |
| GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006357 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009739 | GO:GO:0009751 |
| GO:GO:0009987 | GO:GO:0030154 | GO:GO:0043565 | GO:GO:0044212 | InterPro:Homeobox-like_sf | InterPro:IPR017930 |
| InterPro:Myb_dom | RefSeq:NP_201380.1 | UniProt:O49538 | PFAM:PF00249 | PO:PO:0007611 | PO:PO:0009005 |
| PO:PO:0009046 | PO:PO:0020100 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF654 | InterPro:SANT/Myb |
| SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0000060DED | SEG:seg | : | : |
Description
ATMYB68At5g65790 [Source:UniProtKB/TrEMBL;Acc:O49538]
Coordinates
chr5:+:26322817..26324609
Molecular Weight (calculated)
41844.0 Da
IEP (calculated)
6.105
GRAVY (calculated)
-0.726
Length
374 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRAPCCDKA NVKKGPWSPE EDAKLKDYIE NSGTGGNWIA LPQKIGLRRC GKSCRLRWLN YLRPNIKHGG FSEEEDNIIC NLYVTIGSRW SIIAAQLPGR
101: TDNDIKNYWN TRLKKKLLNK QRKEFQEARM KQEMVMMKRQ QQGQGQGQSN GSTDLYLNNM FGSSPWPLLP QLPPPHHQIP LGMMEPTSCN YYQTTPSCNL
201: EQKPLITLKN MVKIEEEQER TNPDHHHQDS VTNPFDFSFS QLLLDPNYYL GSGGGGEGDF AIMSSSTNSP LPNTSSDQHP SQQQEILQWF GSSNFQTEAI
301: NDMFINNNNN IVNLETIENT KVYGDASVAG AAVRAALGGG TTSTSADQST ISWEDITSLV NSEDASYFNA PNHV
101: TDNDIKNYWN TRLKKKLLNK QRKEFQEARM KQEMVMMKRQ QQGQGQGQSN GSTDLYLNNM FGSSPWPLLP QLPPPHHQIP LGMMEPTSCN YYQTTPSCNL
201: EQKPLITLKN MVKIEEEQER TNPDHHHQDS VTNPFDFSFS QLLLDPNYYL GSGGGGEGDF AIMSSSTNSP LPNTSSDQHP SQQQEILQWF GSSNFQTEAI
301: NDMFINNNNN IVNLETIENT KVYGDASVAG AAVRAALGGG TTSTSADQST ISWEDITSLV NSEDASYFNA PNHV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.