Factsheet for Bra037828.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18676	Canola	nucleus	97.13	97.13
CDY60980	Canola	nucleus	95.22	95.22
AT5G65790.1	Thale cress	nucleus	88.22	74.06
Bra024419.1-P	Field mustard	nucleus	84.39	72.01
Bra031847.1-P	Field mustard	nucleus	83.44	70.62
Bra017963.1-P	Field mustard	nucleus	60.51	63.33
GSMUA_Achr5P21840_001	Banana	nucleus	32.48	49.28
GSMUA_Achr4P28090_001	Banana	nucleus	35.03	48.67
GSMUA_Achr10P...	Banana	nucleus	35.03	41.04
GSMUA_Achr7P08150_001	Banana	nucleus	32.8	40.23
GSMUA_Achr5P01930_001	Banana	nucleus	35.99	40.21
KRH28317	Soybean	nucleus	43.31	39.08
KRH77168	Soybean	nucleus	42.99	38.9
Bra005234.1-P	Field mustard	nucleus	35.03	38.19
Bra023085.1-P	Field mustard	nucleus	34.71	37.72
Solyc04g077260.2.1	Tomato	nucleus	38.85	37.54
Bra017218.1-P	Field mustard	nucleus	34.39	37.24
PGSC0003DMT400012702	Potato	nucleus	38.85	37.08
GSMUA_Achr4P32240_001	Banana	nucleus	32.8	36.92
Bra011785.1-P	Field mustard	nucleus	35.03	36.07
GSMUA_Achr6P01850_001	Banana	nucleus	36.62	34.53
Bra020428.1-P	Field mustard	nucleus	36.31	34.34
Bra006811.1-P	Field mustard	nucleus	35.99	34.14
GSMUA_Achr6P31740_001	Banana	nucleus	36.31	34.03
Bra002448.1-P	Field mustard	nucleus	31.85	29.94
Bra020228.1-P	Field mustard	nucleus	30.89	29.48
Bra002847.1-P	Field mustard	nucleus	25.48	25.0
Bra025337.1-P	Field mustard	nucleus	25.48	24.77
Bra035604.1-P	Field mustard	nucleus	25.16	24.69

Protein Annotations

EnsemblPlants:Bra037828.1	EnsemblPlants:Bra037828.1-P	EnsemblPlantsGene:Bra037828	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:SANT/Myb
PANTHER:PTHR10641	PANTHER:PTHR10641:SF654	PFAM:PF00249	PFscan:PS51294	SEG:seg	SMART:SM00717
SUPFAM:SSF46689	UniParc:UPI0002541BAA	UniProt:M4F9R5	MapMan:15.5.2.1	:	:

Description

AT5G65790 (E=1e-076) ATMYB68, MYB68 | MYB68 (MYB DOMAIN PROTEIN 68); DNA binding / transcription factor

Coordinates

chrA09:+:3808002..3812076

Molecular Weight (calculated)

35319.2 Da

IEP (calculated)

5.455

GRAVY (calculated)

-0.769

Length

314 amino acids

Sequence
(BLAST)

001: MGRAPCCDKA NVKKGPWSPE EDAKLKDYIE NSGTGGNWIA LPQKIGLRRC GKSCRLRWLT YLRPNIKHVG FSEEEDNIIC NLYVTIGSRW SIIAAQLSGR
101: TDNDIKNYWN TRLKKKLLNK QRKEFQEARM KQEMVMMKRQ QEGHDHINEQ KPLITFKNMV KIEEEPERTN PYNPQHQNSI TNPFDVSFSQ LLLDPNYYLG
201: SGGGAEGDFA IMSSSTNSPL PNTSGDQNEH QQQEILQWFG SSNLQTEASS DMFLNNIGNL ETNEDTRFYS SLAGVGAALA GGTTSTSADQ STISWEDITS
301: LVNSEDASYF NGPN

Best Arabidopsis Sequence Match ( AT5G65790.1 )
(BLAST)

001: MGRAPCCDKA NVKKGPWSPE EDAKLKDYIE NSGTGGNWIA LPQKIGLRRC GKSCRLRWLN YLRPNIKHGG FSEEEDNIIC NLYVTIGSRW SIIAAQLPGR
101: TDNDIKNYWN TRLKKKLLNK QRKEFQEARM KQEMVMMKRQ QQGQGQGQSN GSTDLYLNNM FGSSPWPLLP QLPPPHHQIP LGMMEPTSCN YYQTTPSCNL
201: EQKPLITLKN MVKIEEEQER TNPDHHHQDS VTNPFDFSFS QLLLDPNYYL GSGGGGEGDF AIMSSSTNSP LPNTSSDQHP SQQQEILQWF GSSNFQTEAI
301: NDMFINNNNN IVNLETIENT KVYGDASVAG AAVRAALGGG TTSTSADQST ISWEDITSLV NSEDASYFNA PNHV

Arabidopsis Description

ATMYB68At5g65790 [Source:UniProtKB/TrEMBL;Acc:O49538]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.