Factsheet for Bra024419.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45629	Canola	nucleus	97.83	97.83
CDY08749	Canola	nucleus	12.77	92.16
AT5G65790.1	Thale cress	nucleus	88.04	86.63
Bra031847.1-P	Field mustard	nucleus	85.87	85.18
Bra037828.1-P	Field mustard	nucleus	72.01	84.39
Bra017963.1-P	Field mustard	nucleus	56.52	69.33
GSMUA_Achr4P28090_001	Banana	nucleus	32.07	52.21
GSMUA_Achr5P21840_001	Banana	nucleus	28.8	51.21
GSMUA_Achr10P...	Banana	nucleus	32.07	44.03
KRH28317	Soybean	nucleus	39.67	41.95
GSMUA_Achr7P08150_001	Banana	nucleus	29.08	41.8
KRH77168	Soybean	nucleus	39.4	41.79
GSMUA_Achr5P01930_001	Banana	nucleus	31.79	41.64
Bra005234.1-P	Field mustard	nucleus	31.52	40.28
Solyc04g077260.2.1	Tomato	nucleus	35.33	40.0
PGSC0003DMT400012702	Potato	nucleus	35.6	39.82
Bra023085.1-P	Field mustard	nucleus	31.25	39.79
GSMUA_Achr4P32240_001	Banana	nucleus	30.16	39.78
Bra011785.1-P	Field mustard	nucleus	32.88	39.67
Bra017218.1-P	Field mustard	nucleus	30.98	39.31
Bra020428.1-P	Field mustard	nucleus	33.97	37.65
Bra006811.1-P	Field mustard	nucleus	33.42	37.16
GSMUA_Achr6P01850_001	Banana	nucleus	33.15	36.64
GSMUA_Achr6P31740_001	Banana	nucleus	32.88	36.12
Bra002448.1-P	Field mustard	nucleus	28.8	31.74
Bra020228.1-P	Field mustard	nucleus	28.26	31.61
Bra002847.1-P	Field mustard	nucleus	23.1	26.56
Bra035604.1-P	Field mustard	nucleus	22.83	26.25
Bra025337.1-P	Field mustard	nucleus	22.83	26.01

Protein Annotations

EnsemblPlants:Bra024419.1	EnsemblPlants:Bra024419.1-P	EnsemblPlantsGene:Bra024419	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:SANT/Myb
PANTHER:PTHR10641	PANTHER:PTHR10641:SF654	PFAM:PF00249	PFscan:PS51294	SEG:seg	SMART:SM00717
SUPFAM:SSF46689	UniParc:UPI000253EEAD	UniProt:M4E6L5	MapMan:15.5.2.1	:	:

Description

AT5G65790 (E=8e-153) ATMYB68, MYB68 | MYB68 (MYB DOMAIN PROTEIN 68); DNA binding / transcription factor

Coordinates

chrA06:+:15677597..15678953

Molecular Weight (calculated)

41502.5 Da

IEP (calculated)

5.841

GRAVY (calculated)

-0.748

Length

368 amino acids

Sequence
(BLAST)

001: MGRAPCCDKA NVKKGPWSPE EDAKLKDYIE NNGTGGNWIA LPQKIGLRRC GKSCRLRWLN YLRPNIKHGG FSEEEDNIIC NLYVTIGSRW SIIAAQLPGR
101: TDNDIKNYWN TRLKKKLLNK QRKEYQEARM KQDMVMIKRQ EQGQGQSNAS RDLYSNSMFG SSPWPLLPQL PSPHHQVPLV MMEPTSCNYY QMTPSCNFEQ
201: KPLITLKNMV KTEEEPERTN PDHHHPEYSI TNPFDFSFSQ LLLDPNYYLE PVGGEGELAI TSSSTNSPLP NTSADHHQQQ QEILQWFGSS NFQTEAVNDM
301: FLSNNDIANL ETNENTKFYG NLPVAGAAAA LAGGTTSTSA DQSTISWEDI TSLVNSDDAS YFNGPNHL

Best Arabidopsis Sequence Match ( AT5G65790.1 )
(BLAST)

001: MGRAPCCDKA NVKKGPWSPE EDAKLKDYIE NSGTGGNWIA LPQKIGLRRC GKSCRLRWLN YLRPNIKHGG FSEEEDNIIC NLYVTIGSRW SIIAAQLPGR
101: TDNDIKNYWN TRLKKKLLNK QRKEFQEARM KQEMVMMKRQ QQGQGQGQSN GSTDLYLNNM FGSSPWPLLP QLPPPHHQIP LGMMEPTSCN YYQTTPSCNL
201: EQKPLITLKN MVKIEEEQER TNPDHHHQDS VTNPFDFSFS QLLLDPNYYL GSGGGGEGDF AIMSSSTNSP LPNTSSDQHP SQQQEILQWF GSSNFQTEAI
301: NDMFINNNNN IVNLETIENT KVYGDASVAG AAVRAALGGG TTSTSADQST ISWEDITSLV NSEDASYFNA PNHV

Arabidopsis Description

ATMYB68At5g65790 [Source:UniProtKB/TrEMBL;Acc:O49538]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.