Factsheet for Bra011785.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69328	Canola	nucleus	94.75	94.75
AT4G37780.1	Thale cress	nucleus	75.74	75.74
TraesCS5A01G405800.1	Wheat	nucleus	39.34	38.59
TraesCS5B01G410500.1	Wheat	nucleus	39.34	38.59
TraesCS5D01G415800.1	Wheat	nucleus	39.34	38.59
Zm00001d034207_P001	Maize	nucleus	39.67	38.53
Os03t0771100-01	Rice	nucleus	40.33	38.32
HORVU5Hr1G098540.1	Barley	nucleus	39.02	38.26
EER90818	Sorghum	nucleus	40.98	38.23
Bra017963.1-P	Field mustard	nucleus	37.38	38.0
Bra006811.1-P	Field mustard	nucleus	39.02	35.95
Bra005234.1-P	Field mustard	nucleus	33.77	35.76
Zm00001d013164_P002	Maize	nucleus	40.98	35.71
Bra017218.1-P	Field mustard	nucleus	33.77	35.52
Bra023085.1-P	Field mustard	nucleus	33.44	35.29
Bra020428.1-P	Field mustard	nucleus	38.36	35.24
Bra037828.1-P	Field mustard	nucleus	36.07	35.03
Bra031847.1-P	Field mustard	nucleus	40.98	33.69
Bra024419.1-P	Field mustard	nucleus	39.67	32.88
Bra002448.1-P	Field mustard	nucleus	32.79	29.94
Bra020228.1-P	Field mustard	nucleus	31.15	28.88
Bra035604.1-P	Field mustard	nucleus	28.85	27.5
Bra002847.1-P	Field mustard	nucleus	28.85	27.5
Bra025337.1-P	Field mustard	nucleus	27.87	26.32

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	EnsemblPlantsGene:Bra011785	EnsemblPlants:Bra011785.1	EnsemblPlants:Bra011785.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0008150	GO:GO:0009664	GO:GO:0009987
GO:GO:0016043	InterPro:Homeobox-like_sf	InterPro:IPR017930	UniProt:M4D5M8	InterPro:Myb_dom	PFAM:PF00249
PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF946	InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689
UniParc:UPI000254641C	SEG:seg	:	:	:	:

Description

AT4G37780 (E=4e-114) MYB87, ATMYB87 | MYB87 (MYB DOMAIN PROTEIN 87); DNA binding / transcription factor

Coordinates

chrA01:+:546010..547175

Molecular Weight (calculated)

34934.2 Da

IEP (calculated)

6.834

GRAVY (calculated)

-0.673

Length

305 amino acids

Sequence
(BLAST)

001: MGRAPCCDKT VVKKGPWSPE EDAMLKSYIE KHGTGNNWIA LPHKIGIKRC GKSCRLRWLN YLRPNLKHGG FTDEEDYIIC SLYITIGSRW SIIASQLPGR
101: TDNDIKNYWN TRLKKKLLSK QGKAIHQQLS LRLEPETTSK RSSFGQNQIL MFHDENAKPP LNQTIHSKMV DPSITSFAME EKRMVPVLES YSWEQNKVWL
201: DIDHDAASSS YHHHASPHFN SMTSSSSSIG TNSPLQMSHY TINDNNQGDQ EMFFMAGFEN LQDELFDEII NNITTEFEFR GTETLNNNCL GHEINSFVDC
301: PLKDN

Best Arabidopsis Sequence Match ( AT4G37780.1 )
(BLAST)

001: MGRAPCCDKM AVKKGPWSTE EDAVLKSYIE KHGTGNNWIS LPQRIGIKRC GKSCRLRWLN YLRPNLKHGG FTDEEDYIIC SLYITIGSRW SIIASQLPGR
101: TDNDIKNYWN TRLKKKLLSK QGKAFHQQLN VKFERGTTSS SSSQNQIQIF HDENTKSNQT LYNQVVDPSM RAFAMEEQSM IKNQILEPFS WEPNKVLFDV
201: DYDAAASSYH HHASPSLNSM SSTSSIGTNN SSLQMSHYTV NHNDHDQPDM FFMDGFENFQ AELFDEIANN NTVENGFDGT EILINNNYLD HDISSFIDYP
301: LYDNE

Arabidopsis Description

MYB87Transcription factor MYB87 [Source:UniProtKB/Swiss-Prot;Acc:F4JSU0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.