Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra031847.1-P | Field mustard | nucleus | 99.73 | 99.73 |
| CDY52538 | Canola | nucleus | 96.77 | 97.29 |
| CDY08749 | Canola | nucleus | 12.13 | 88.24 |
| CDY45629 | Canola | nucleus | 85.98 | 86.68 |
| AT5G65790.1 | Thale cress | nucleus | 87.06 | 86.36 |
| CDY08748 | Canola | nucleus | 85.44 | 86.14 |
| CDY18676 | Canola | nucleus | 71.43 | 84.39 |
| CDY60980 | Canola | nucleus | 70.89 | 83.76 |
| CDY08162 | Canola | nucleus | 57.41 | 71.0 |
| CDY65680 | Canola | nucleus | 56.87 | 70.33 |
| GSMUA_Achr4P28090_001 | Banana | nucleus | 31.27 | 51.33 |
| GSMUA_Achr5P21840_001 | Banana | nucleus | 28.3 | 50.72 |
| GSMUA_Achr10P... | Banana | nucleus | 31.27 | 43.28 |
| GSMUA_Achr7P08150_001 | Banana | nucleus | 29.11 | 42.19 |
| GSMUA_Achr5P01930_001 | Banana | nucleus | 31.54 | 41.64 |
| KRH77168 | Soybean | nucleus | 38.54 | 41.21 |
| KRH28317 | Soybean | nucleus | 38.54 | 41.09 |
| CDX69328 | Canola | nucleus | 33.15 | 40.33 |
| GSMUA_Achr4P32240_001 | Banana | nucleus | 30.19 | 40.14 |
| CDY33205 | Canola | nucleus | 30.73 | 39.58 |
| CDX75005 | Canola | nucleus | 30.73 | 39.58 |
| CDY46743 | Canola | nucleus | 30.46 | 39.1 |
| Solyc04g077260.2.1 | Tomato | nucleus | 33.96 | 38.77 |
| CDX79698 | Canola | nucleus | 30.19 | 38.75 |
| PGSC0003DMT400012702 | Potato | nucleus | 34.23 | 38.6 |
| CDY11860 | Canola | nucleus | 33.69 | 37.43 |
| GSMUA_Achr6P01850_001 | Banana | nucleus | 33.42 | 37.24 |
| CDX88631 | Canola | nucleus | 33.15 | 37.16 |
| CDY25898 | Canola | nucleus | 32.34 | 37.04 |
| GSMUA_Achr6P31740_001 | Banana | nucleus | 32.88 | 36.42 |
| CDY64987 | Canola | nucleus | 22.1 | 34.31 |
| CDY09184 | Canola | nucleus | 28.3 | 31.91 |
| CDY50326 | Canola | nucleus | 28.3 | 31.44 |
| CDY26977 | Canola | nucleus | 28.3 | 30.88 |
| CDY17391 | Canola | nucleus | 23.45 | 27.19 |
| CDY57424 | Canola | nucleus | 22.91 | 26.56 |
| CDX86430 | Canola | nucleus | 22.64 | 26.01 |
| CDX85201 | Canola | endoplasmic reticulum, vacuole | 22.64 | 12.84 |
| CDY40299 | Canola | nucleus | 2.96 | 5.5 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:A0A078HHJ1 | UniProt:A0A078HHJ1 | EnsemblPlants:CDY37840 | ProteinID:CDY37840 |
| ProteinID:CDY37840.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00064794001 |
| InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF654 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0001EF0DF8 | SEG:seg |
Description
BnaAnng05010DBnaAnng05010D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HHJ1]
Coordinates
chrLK032409:+:183200..184851
Molecular Weight (calculated)
41740.8 Da
IEP (calculated)
6.509
GRAVY (calculated)
-0.757
Length
371 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRAPCCDKA NVKKGPWSPE EDAKLKDYIE SSGTGGNWIA LPQKIGLRRC GKSCRLRWLN YLRPNIKHGG FSEEEDNIIC NLYVTIGSRW SIIAAQLPGR
101: TDNDIKNYWN TRLKKKLLNK QRKEFQEARM KQEMVMMKRQ QQGQGQCQSN GSTDLYLNNM FRSSPWPLLP HLPPPHSQVP LVMMEPTSCN YYQPTPSCAL
201: EQKPLIPLKN MVKIEAEPER SNPDHHYPED SMTNSFDLSF SQLLLDPNYY LESGGGEGEF ALMSRSTNSP LPNTSSDHHQ HQKEITQWFG SSNFQTEAIN
301: DVFLNNNNLA NFETNDENAK LYANSSVAGA GAAFAGGTTS TSADQSTISW EDITSLVNSD DARYFNGPNN V
101: TDNDIKNYWN TRLKKKLLNK QRKEFQEARM KQEMVMMKRQ QQGQGQCQSN GSTDLYLNNM FRSSPWPLLP HLPPPHSQVP LVMMEPTSCN YYQPTPSCAL
201: EQKPLIPLKN MVKIEAEPER SNPDHHYPED SMTNSFDLSF SQLLLDPNYY LESGGGEGEF ALMSRSTNSP LPNTSSDHHQ HQKEITQWFG SSNFQTEAIN
301: DVFLNNNNLA NFETNDENAK LYANSSVAGA GAAFAGGTTS TSADQSTISW EDITSLVNSD DARYFNGPNN V
001: MGRAPCCDKA NVKKGPWSPE EDAKLKDYIE NSGTGGNWIA LPQKIGLRRC GKSCRLRWLN YLRPNIKHGG FSEEEDNIIC NLYVTIGSRW SIIAAQLPGR
101: TDNDIKNYWN TRLKKKLLNK QRKEFQEARM KQEMVMMKRQ QQGQGQGQSN GSTDLYLNNM FGSSPWPLLP QLPPPHHQIP LGMMEPTSCN YYQTTPSCNL
201: EQKPLITLKN MVKIEEEQER TNPDHHHQDS VTNPFDFSFS QLLLDPNYYL GSGGGGEGDF AIMSSSTNSP LPNTSSDQHP SQQQEILQWF GSSNFQTEAI
301: NDMFINNNNN IVNLETIENT KVYGDASVAG AAVRAALGGG TTSTSADQST ISWEDITSLV NSEDASYFNA PNHV
101: TDNDIKNYWN TRLKKKLLNK QRKEFQEARM KQEMVMMKRQ QQGQGQGQSN GSTDLYLNNM FGSSPWPLLP QLPPPHHQIP LGMMEPTSCN YYQTTPSCNL
201: EQKPLITLKN MVKIEEEQER TNPDHHHQDS VTNPFDFSFS QLLLDPNYYL GSGGGGEGDF AIMSSSTNSP LPNTSSDQHP SQQQEILQWF GSSNFQTEAI
301: NDMFINNNNN IVNLETIENT KVYGDASVAG AAVRAALGGG TTSTSADQST ISWEDITSLV NSEDASYFNA PNHV
Arabidopsis Description
ATMYB68At5g65790 [Source:UniProtKB/TrEMBL;Acc:O49538]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.