Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra006811.1-P | Field mustard | nucleus | 99.7 | 99.7 |
| CDY11860 | Canola | nucleus | 98.79 | 97.9 |
| AT5G57620.1 | Thale cress | nucleus | 91.24 | 90.69 |
| CDY25898 | Canola | nucleus | 86.1 | 87.96 |
| Zm00001d018319_P001 | Maize | nucleus | 22.96 | 84.44 |
| CDY08749 | Canola | nucleus | 12.39 | 80.39 |
| KRH18986 | Soybean | nucleus | 54.68 | 50.0 |
| KRH02902 | Soybean | nucleus | 54.98 | 49.86 |
| GSMUA_Achr9P13610_001 | Banana | nucleus | 41.69 | 44.52 |
| GSMUA_Achr5P22760_001 | Banana | nucleus | 41.69 | 43.67 |
| VIT_11s0052g01490.t01 | Wine grape | nucleus | 46.53 | 42.19 |
| GSMUA_Achr8P24780_001 | Banana | nucleus | 38.97 | 42.02 |
| Os08t0248700-01 | Rice | nucleus | 39.27 | 41.14 |
| TraesCS1B01G265400.1 | Wheat | nucleus | 38.97 | 40.57 |
| TraesCS1D01G252300.1 | Wheat | nucleus | 24.77 | 40.39 |
| HORVU1Hr1G061220.1 | Barley | nucleus | 38.67 | 40.38 |
| PGSC0003DMT400009926 | Potato | nucleus | 36.56 | 40.33 |
| Solyc09g008250.2.1 | Tomato | nucleus | 35.95 | 40.2 |
| PGSC0003DMT400005085 | Potato | nucleus | 36.25 | 40.0 |
| TraesCS1A01G252600.1 | Wheat | nucleus | 38.67 | 39.88 |
| CDX75005 | Canola | nucleus | 34.44 | 39.58 |
| GSMUA_Achr7P19530_001 | Banana | nucleus | 40.48 | 39.3 |
| CDY33205 | Canola | nucleus | 34.14 | 39.24 |
| EES14801 | Sorghum | nucleus | 37.76 | 39.06 |
| CDX69328 | Canola | nucleus | 35.95 | 39.02 |
| CDY46743 | Canola | nucleus | 33.84 | 38.75 |
| CDY08162 | Canola | nucleus | 35.05 | 38.67 |
| CDX79698 | Canola | nucleus | 33.53 | 38.41 |
| CDY65680 | Canola | nucleus | 34.44 | 38.0 |
| CDY60980 | Canola | nucleus | 35.35 | 37.26 |
| HORVU5Hr1G063410.1 | Barley | nucleus | 33.84 | 37.21 |
| CDY18676 | Canola | nucleus | 35.05 | 36.94 |
| Zm00001d050185_P002 | Maize | nucleus | 37.16 | 36.83 |
| TraesCS5B01G216900.1 | Wheat | nucleus | 34.14 | 36.81 |
| TraesCS5A01G217900.1 | Wheat | nucleus | 34.14 | 36.57 |
| TraesCS6B01G377400.1 | Wheat | nucleus | 40.18 | 36.54 |
| HORVU6Hr1G083250.1 | Barley | nucleus | 39.88 | 36.36 |
| TraesCS6A01G344700.1 | Wheat | nucleus | 39.88 | 36.16 |
| TraesCS6D01G327300.1 | Wheat | nucleus | 39.88 | 36.16 |
| TraesCS5D01G225800.1 | Wheat | nucleus | 34.44 | 36.08 |
| CDY64987 | Canola | nucleus | 25.08 | 34.73 |
| CDY09184 | Canola | nucleus | 33.53 | 33.74 |
| CDY50326 | Canola | nucleus | 33.84 | 33.53 |
| CDY45629 | Canola | nucleus | 37.16 | 33.42 |
| CDY52538 | Canola | nucleus | 37.16 | 33.33 |
| CDY37840 | Canola | nucleus | 37.16 | 33.15 |
| CDY08748 | Canola | nucleus | 36.86 | 33.15 |
| CDY26977 | Canola | nucleus | 33.84 | 32.94 |
| Zm00001d005784_P001 | Maize | nucleus | 34.14 | 32.66 |
| Zm00001d052069_P001 | Maize | nucleus | 38.97 | 32.58 |
| EES05913 | Sorghum | nucleus | 39.27 | 32.26 |
| EER98942 | Sorghum | nucleus | 35.65 | 31.98 |
| Zm00001d020569_P001 | Maize | nucleus | 34.74 | 31.17 |
| Os02t0786400-00 | Rice | extracellular | 38.97 | 29.59 |
| CDY17391 | Canola | nucleus | 26.28 | 27.19 |
| Os09t0431300-00 | Rice | nucleus | 36.25 | 26.97 |
| CDY57424 | Canola | nucleus | 25.98 | 26.88 |
| CDX86430 | Canola | nucleus | 25.68 | 26.32 |
| CDX85201 | Canola | endoplasmic reticulum, vacuole | 25.38 | 12.84 |
| CDY40299 | Canola | nucleus | 3.93 | 6.5 |
Protein Annotations
| EnsemblPlants:CDX88631 | EnsemblPlantsGene:GSBRNA2T00148669001 | Gene3D:1.10.10.60 | GO:A0A078DHB0 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF928 | PFAM:PF00249 | PFscan:PS51294 | ProteinID:CDX88631 | ProteinID:CDX88631.1 |
| SEG:seg | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EE24E6 | MapMan:15.5.2.1 | : |
Description
BnaA03g10180D
Coordinates
chrLK031856:+:269627..271237
Molecular Weight (calculated)
37434.9 Da
IEP (calculated)
7.235
GRAVY (calculated)
-0.744
Length
331 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRAPCCDKA NVKKGPWSPE EDVKLKDYID KYGTGGNWIA LPQKVGLKRC GKSCRLRWLN YLRPNIKHGG FSEEEDSIIL SLYISIGSRW SIIAAQLPGR
101: TDNDIKNYWN TKLKKKLLGR QKQMNRQDSI ADSNENNISS NNNKSPQNLS NSALERLQLH MQLQNLQSPF SSFYNNPMLW PKLHPLLQST PDQNSKLGSQ
201: ESFHPLGVNV VHQNNNIKLA EINDGVSPLY SENVEQSLNP THGFQPNFGF SQDLQLDNHN MDLMNRGGSK ELFQVGNEFE LTNGSSWWSE EVELERKTIS
301: SSSWGSASVL DQTTDGVVML QDYGQMSYHS V
101: TDNDIKNYWN TKLKKKLLGR QKQMNRQDSI ADSNENNISS NNNKSPQNLS NSALERLQLH MQLQNLQSPF SSFYNNPMLW PKLHPLLQST PDQNSKLGSQ
201: ESFHPLGVNV VHQNNNIKLA EINDGVSPLY SENVEQSLNP THGFQPNFGF SQDLQLDNHN MDLMNRGGSK ELFQVGNEFE LTNGSSWWSE EVELERKTIS
301: SSSWGSASVL DQTTDGVVML QDYGQMSYHS V
001: MGRAPCCDKA NVKKGPWSPE EDVKLKDYID KYGTGGNWIA LPQKIGLKRC GKSCRLRWLN YLRPNIKHGG FSEEEDRIIL SLYISIGSRW SIIAAQLPGR
101: TDNDIKNYWN TKLKKKLLGR QKQMNRQDSI TDSTENNLSN NNNNKSPQNL SNSALERLQL HMQLQNLQSP FSSFYNNPIL WPKLHPLLQS TTTNQNPKLA
201: SQESFHPLGV NVDHQHNNTK LAQINNGASS LYSENVEQSQ NPAHEFQPNF GFSQDLRLDN HNMDFMNRGV SKELFQVGNE FELTNGSSWW SEEVELERKT
301: TSSSSWGSAS VLDQTTEGMV MLQDYAQMSY HSV
101: TDNDIKNYWN TKLKKKLLGR QKQMNRQDSI TDSTENNLSN NNNNKSPQNL SNSALERLQL HMQLQNLQSP FSSFYNNPIL WPKLHPLLQS TTTNQNPKLA
201: SQESFHPLGV NVDHQHNNTK LAQINNGASS LYSENVEQSQ NPAHEFQPNF GFSQDLRLDN HNMDFMNRGV SKELFQVGNE FELTNGSSWW SEEVELERKT
301: TSSSSWGSAS VLDQTTEGMV MLQDYAQMSY HSV
Arabidopsis Description
MYB36Transcription factor MYB36 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKL2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.