Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra025337.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| AT3G28470.1 | Thale cress | nucleus | 84.21 | 85.8 |
| Solyc03g059200.1.1 | Tomato | nucleus | 46.44 | 57.03 |
| CDY08749 | Canola | nucleus | 8.67 | 54.9 |
| PGSC0003DMT400022009 | Potato | nucleus | 45.82 | 50.51 |
| KRG93460 | Soybean | nucleus | 51.7 | 48.41 |
| CDX85201 | Canola | endoplasmic reticulum, vacuole | 92.26 | 45.57 |
| KRH18536 | Soybean | endoplasmic reticulum | 52.01 | 44.8 |
| Os03t0296000-00 | Rice | nucleus | 13.93 | 43.69 |
| CDY64987 | Canola | nucleus | 30.34 | 41.0 |
| GSMUA_Achr3P10060_001 | Banana | nucleus | 38.7 | 39.06 |
| VIT_14s0066g02180.t01 | Wine grape | nucleus | 52.63 | 38.99 |
| HORVU4Hr1G055680.1 | Barley | nucleus | 34.98 | 37.42 |
| TraesCS4D01G192400.1 | Wheat | nucleus | 35.6 | 37.34 |
| TraesCS4B01G191200.1 | Wheat | nucleus | 35.29 | 37.01 |
| TraesCS4A01G113000.1 | Wheat | nucleus | 34.98 | 36.81 |
| Zm00001d028777_P001 | Maize | nucleus | 34.06 | 34.48 |
| OQU92760 | Sorghum | nucleus | 34.98 | 34.45 |
| CDY57424 | Canola | nucleus | 32.82 | 33.12 |
| CDY17391 | Canola | nucleus | 32.2 | 32.5 |
| CDX75005 | Canola | nucleus | 25.7 | 28.82 |
| CDY46743 | Canola | nucleus | 25.39 | 28.37 |
| CDX79698 | Canola | nucleus | 25.39 | 28.37 |
| CDY33205 | Canola | nucleus | 25.08 | 28.12 |
| CDX69328 | Canola | nucleus | 26.32 | 27.87 |
| CDY08162 | Canola | nucleus | 24.77 | 26.67 |
| CDY60980 | Canola | nucleus | 25.39 | 26.11 |
| CDY18676 | Canola | nucleus | 25.39 | 26.11 |
| CDY65680 | Canola | nucleus | 24.15 | 26.0 |
| CDY25898 | Canola | nucleus | 26.01 | 25.93 |
| CDX88631 | Canola | nucleus | 26.32 | 25.68 |
| CDY11860 | Canola | nucleus | 26.32 | 25.45 |
| CDY09184 | Canola | nucleus | 25.7 | 25.23 |
| CDY50326 | Canola | nucleus | 25.39 | 24.55 |
| CDY26977 | Canola | nucleus | 25.08 | 23.82 |
| CDY08748 | Canola | nucleus | 26.01 | 22.83 |
| CDY45629 | Canola | nucleus | 26.01 | 22.83 |
| CDY52538 | Canola | nucleus | 26.01 | 22.76 |
| CDY37840 | Canola | nucleus | 26.01 | 22.64 |
| CDY40299 | Canola | nucleus | 3.1 | 5.0 |
Protein Annotations
| EnsemblPlants:CDX86430 | EnsemblPlantsGene:GSBRNA2T00144573001 | Gene3D:1.10.10.60 | GO:A0A078DB07 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF716 | PFAM:PF00249 | PFscan:PS51294 | ProteinID:CDX86430 | ProteinID:CDX86430.1 |
| SEG:seg | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI000253FB68 | MapMan:15.5.2.1 | : |
Description
BnaA06g31470D
Coordinates
chrLK031845:+:1533877..1535015
Molecular Weight (calculated)
35922.9 Da
IEP (calculated)
8.172
GRAVY (calculated)
-0.600
Length
323 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRPPCCDKS NVKKGLWTAE EDAKILAYVA IHGVGNWSLI PKKAGLNRCG KSCRLRWTNY LRPDLKHDSF SPQEEELIIQ CHRIIGSRWS SIARKLPGRT
101: DNDVKNHWNT KLKKRLVKMG IDPVTHKPVS QVLTEFRNIS GHGNSSEPFV RNFKTEPSNN SILTQSNSAW EMMRNTTSHE SYHNSPMIFT HPTSSEFHFS
201: NHSNFPLNGA TSSCSSSSSS ASITQPNQGA QAPVTTFCWS DYLLSDPVLP LSSQTQVVGS SATSNLTFAQ NENFNSQGEC SSQKIASKAS GTCHSASSFV
301: DEILDKDQEM LSQFPQLLND FDY
101: DNDVKNHWNT KLKKRLVKMG IDPVTHKPVS QVLTEFRNIS GHGNSSEPFV RNFKTEPSNN SILTQSNSAW EMMRNTTSHE SYHNSPMIFT HPTSSEFHFS
201: NHSNFPLNGA TSSCSSSSSS ASITQPNQGA QAPVTTFCWS DYLLSDPVLP LSSQTQVVGS SATSNLTFAQ NENFNSQGEC SSQKIASKAS GTCHSASSFV
301: DEILDKDQEM LSQFPQLLND FDY
001: MGRPPCCDKS NVKKGLWTEE EDAKILAYVA IHGVGNWSLI PKKAGLNRCG KSCRLRWTNY LRPDLKHDSF STQEEELIIE CHRAIGSRWS SIARKLPGRT
101: DNDVKNHWNT KLKKKLMKMG IDPVTHKPVS QLLAEFRNIS GHGNASFKTE PSNNSILTQS NSAWEMMRNT TTNHESYYTN SPMMFTNSSE YQTTPFHFYS
201: HPNHLLNGTT SSCSSSSSST SITQPNQVPQ TPVTNFYWSD FLLSDPVPQV VGSSATSDLT FTQNEHHFNI EAEYISQNID SKASGTCHSA SSFVDEILDK
301: DQEMLSQFPQ LLNDFDY
101: DNDVKNHWNT KLKKKLMKMG IDPVTHKPVS QLLAEFRNIS GHGNASFKTE PSNNSILTQS NSAWEMMRNT TTNHESYYTN SPMMFTNSSE YQTTPFHFYS
201: HPNHLLNGTT SSCSSSSSST SITQPNQVPQ TPVTNFYWSD FLLSDPVPQV VGSSATSDLT FTQNEHHFNI EAEYISQNID SKASGTCHSA SSFVDEILDK
301: DQEMLSQFPQ LLNDFDY
Arabidopsis Description
MYB35Transcription factor MYB35 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSI7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.